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梗阻性肥厚型心肌病性别特异性差异的多组学图谱

A Multi-Omics Atlas of Sex-Specific Differences in Obstructive Hypertrophic Cardiomyopathy.

作者信息

Garmany Ramin, Dasari Surendra, Bos J Martijn, Kim Evelyn T, Martinez Katherine A, Tester David J, Dos Remedios Cristobal, Maleszewski Joseph J, Dearani Joseph A, Ommen Steve R, Geske Jeffrey B, Giudicessi John R, Ackerman Michael J

出版信息

bioRxiv. 2024 Feb 27:2024.02.22.581621. doi: 10.1101/2024.02.22.581621.

Abstract

BACKGROUND

Hypertrophic cardiomyopathy (HCM) is a common genetic heart disease. Women with HCM tend to have a later onset but more severe disease course. However, the underlying pathobiological mechanisms for these differences remain unknown.

METHODS

Myectomy samples from 97 patients (53 males/44 females) with symptomatic obstructive HCM and 23 control cardiac tissues were included in this study. RNA-sequencing was performed on all samples. Mass spectrometry-based proteomics and phosphoproteomics was performed on a representative subset of samples.

RESULTS

The transcriptome, proteome, and phosphoproteome was similar between sexes and did not separate on PCA plotting. Overall, there were 482 differentially expressed genes (DEGs) between control females and control males while there were only 53 DEGs between HCM females and HCM males. There were 1963 DEGs between HCM females and control females compared to 1064 DEGs between HCM males and control males. Additionally, there was increased transcriptional downregulation of hypertrophy pathways in HCM females and in HCM males. HCM females had 119 differentially expressed proteins compared to control females while HCM males only had 27 compared to control males. Finally, the phosphoproteome showed females had 341 differentially phosphorylated proteins (DPPs) compared to controls while males only had 184. Interestingly, there was hypophosphorylation and inactivation of hypertrophy pathways in females but hyperphosphorylation and activation in males.

CONCLUSION

There are subtle, but biologically relevant differences in the multi-omics profile of HCM. This study provides the most comprehensive atlas of sex-specific differences in the transcriptome, proteome, and phosphoproteome present at the time of surgical myectomy for obstructive HCM.

摘要

背景

肥厚型心肌病(HCM)是一种常见的遗传性心脏病。患有HCM的女性往往发病较晚,但病程更严重。然而,这些差异背后的病理生物学机制仍不清楚。

方法

本研究纳入了97例有症状的梗阻性HCM患者(53例男性/44例女性)的心肌切除术样本和23个对照心脏组织。对所有样本进行RNA测序。对代表性样本子集进行基于质谱的蛋白质组学和磷酸化蛋白质组学分析。

结果

性别之间的转录组、蛋白质组和磷酸化蛋白质组相似,在主成分分析图上没有分开。总体而言,对照女性和对照男性之间有482个差异表达基因(DEG),而HCM女性和HCM男性之间只有53个DEG。与HCM男性和对照男性之间的1064个DEG相比,HCM女性和对照女性之间有1963个DEG。此外,HCM女性和HCM男性中肥大途径的转录下调均增加。与对照女性相比,HCM女性有119个差异表达蛋白,而与对照男性相比,HCM男性只有27个。最后,磷酸化蛋白质组显示,与对照相比,女性有341个差异磷酸化蛋白(DPP),而男性只有184个。有趣的是,女性中肥大途径存在磷酸化不足和失活,而男性中则存在过度磷酸化和激活。

结论

HCM的多组学特征存在细微但具有生物学相关性的差异。本研究提供了梗阻性HCM手术心肌切除时转录组、蛋白质组和磷酸化蛋白质组中性别特异性差异的最全面图谱。

相似文献

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Multi-Omic Architecture of Obstructive Hypertrophic Cardiomyopathy.梗阻性肥厚型心肌病的多组学结构。
Circ Genom Precis Med. 2023 Apr;16(2):e003756. doi: 10.1161/CIRCGEN.122.003756. Epub 2023 Feb 20.

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