Falcioni Fabio, Bennett Sophie, Stroer-Jarvis Pallas, Popelier Paul L A
Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, UK.
Molecules. 2024 Feb 28;29(5):1043. doi: 10.3390/molecules29051043.
The interaction energies of two series of molecular balances (1-X with X = H, Me, OMe, NMe and 2-Y with Y = H, CN, NO, OMe, NMe) designed to probe carbonyl…carbonyl interactions were analysed at the B3LYP/6-311++G(d,p)-D3 level of theory using the energy partitioning method of Interacting Quantum Atoms/Fragments (IQA/IQF). The partitioned energies are analysed by the Relative Energy Gradient (REG) method, which calculates the correlation between these energies and the total energy of a system, thereby explaining the role atoms have in the energetic behaviour of the total system. The traditional "back-of-the-envelope" open and closed conformations of molecular balances do not correspond to those of the lowest energy. Hence, more care needs to be taken when considering which geometries to use for comparison with the experiment. The REG-IQA method shows that the 1-H and 1-OMe balances behave differently to the 1-Me and 1-NMe balances because the latter show more prominent electrostatics between carbonyl groups and undergoes a larger dihedral rotation due to the bulkiness of the functional groups. For the 2-Y balance, REG-IQA shows the same behaviour across the series as the 1-H and 1-OMe balances. From an atomistic point of view, the formation of the closed conformer is favoured by polarisation and charge-transfer effects on the amide bond across all balances and is counterbalanced by a de-pyramidalisation of the amide nitrogen. Moreover, focusing on the oxygen of the amide carbonyl and the α-carbon of the remaining carbonyl group, electrostatics have a major role in the formation of the closed conformer, which goes against the well-known n-π* interaction orbital overlap concept. However, REG-IQF shows that exchange-correlation energies overtake electrostatics for all the 2-Y balances when working with fragments around the carbonyl groups, while they act on par with electrostatics for the 1-OMe and 1-NMe. REG-IQF also shows that exchange-correlation energies in the 2-Y balance are correlated to the inductive electron-donating and -withdrawing trends on aromatic groups. We demonstrate that methods such as REG-IQA/IQF can help with the fine-tuning of molecular balances prior to the experiment and that the energies that govern the probed interactions are highly dependent on the atoms and functional groups involved.
为探究羰基…羰基相互作用而设计的两个系列分子平衡体系(1-X,其中X = H、Me、OMe、NMe;以及2-Y,其中Y = H、CN、NO、OMe、NMe)的相互作用能,在B3LYP/6-311++G(d,p)-D3理论水平上,采用相互作用量子原子/片段(IQA/IQF)的能量划分方法进行了分析。通过相对能量梯度(REG)方法对划分后的能量进行分析,该方法计算这些能量与体系总能量之间的相关性,从而解释原子在整个体系能量行为中所起的作用。分子平衡体系传统的“信封背面”式开放和闭合构象并非能量最低的构象。因此,在考虑用于与实验进行比较的几何结构时需要更加谨慎。REG-IQA方法表明,1-H和1-OMe平衡体系的行为与1-Me和1-NMe平衡体系不同,因为后者在羰基之间表现出更显著的静电作用,并且由于官能团的体积较大而经历更大的二面角旋转。对于2-Y平衡体系,REG-IQA表明该系列的行为与1-H和1-OMe平衡体系相同。从原子层面来看,在所有平衡体系中,酰胺键上的极化和电荷转移效应有利于闭合构象的形成,而酰胺氮的去金字塔化作用则起到了平衡作用。此外,聚焦于酰胺羰基的氧原子和其余羰基的α-碳原子,静电作用在闭合构象的形成中起主要作用,这与众所周知的n-π*相互作用轨道重叠概念相悖。然而,REG-IQF表明,对于所有2-Y平衡体系,当处理羰基周围的片段时,交换相关能超过了静电作用,而对于1-OMe和1-NMe平衡体系,它们与静电作用相当。REG-IQF还表明,2-Y平衡体系中的交换相关能与芳环上的诱导供电子和吸电子趋势相关。我们证明,REG-IQA/IQF等方法有助于在实验前对分子平衡体系进行微调,并且支配所探究相互作用的能量高度依赖于所涉及的原子和官能团。