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斑点鹦嘴鱼的基因组为深入了解珊瑚礁食性特化鱼类(硬骨鱼纲:隆头鱼科:鹦嘴鱼属)的进化提供了线索。

The spotted parrotfish genome provides insights into the evolution of a coral reef dietary specialist (Teleostei: Labridae: Scarini: ).

作者信息

Tea Yi-Kai, Zhou Yulu, Ewart Kyle M, Cheng Guo, Kawasaki Kazuhiko, DiBattista Joseph D, Ho Simon Y W, Lo Nathan, Fan Shaohua

机构信息

School of Life and Environmental Sciences University of Sydney Sydney New South Wales Australia.

Australian Museum Research Institute Australian Museum Sydney New South Wales Australia.

出版信息

Ecol Evol. 2024 Mar 12;14(3):e11148. doi: 10.1002/ece3.11148. eCollection 2024 Mar.

Abstract

With over 600 valid species, the wrasses (family Labridae) are among the largest and most successful families of the marine teleosts. They feature prominently on coral reefs where they are known not only for their impressive diversity in colouration and form but also for their functional specialisation and ability to occupy a wide variety of trophic guilds. Among the wrasses, the parrotfishes (tribe Scarini) display some of the most dramatic examples of trophic specialisation. Using abrasion-resistant biomineralized teeth, parrotfishes are able to mechanically extract protein-rich micro-photoautotrophs growing in and among reef carbonate material, a dietary niche that is inaccessible to most other teleost fishes. This ability to exploit an otherwise untapped trophic resource is thought to have played a role in the diversification and evolutionary success of the parrotfishes. In order to better understand the key evolutionary innovations leading to the success of these dietary specialists, we sequenced and analysed the genome of a representative species, the spotted parrotfish (). We find significant expansion, selection and duplications within several detoxification gene families and a novel poly-glutamine expansion in the enamel protein ameloblastin, and we consider their evolutionary implications. Our genome provides a useful resource for comparative genomic studies investigating the evolutionary history of this highly specialised teleostean radiation.

摘要

隆头鱼科有600多种有效物种,是海洋硬骨鱼中最大且最成功的科之一。它们在珊瑚礁中占据显著地位,不仅以其令人印象深刻的颜色和形态多样性而闻名,还因其功能特化以及占据多种营养类群的能力而著称。在隆头鱼中,鹦嘴鱼(裂唇鱼族)展现出了一些最显著的营养特化例子。鹦嘴鱼利用耐磨的生物矿化牙齿,能够机械地从珊瑚礁碳酸盐物质中及其中生长的富含蛋白质的微型光合自养生物中获取食物,这是大多数其他硬骨鱼无法利用的饮食生态位。这种利用原本未被开发的营养资源的能力被认为在鹦嘴鱼的多样化和进化成功中发挥了作用。为了更好地理解导致这些饮食特化物种成功的关键进化创新,我们对一种代表性物种——斑点鹦嘴鱼()的基因组进行了测序和分析。我们发现几个解毒基因家族存在显著的扩增、选择和复制,并且釉质蛋白成釉蛋白中有新的多聚谷氨酰胺扩增,我们还考虑了它们的进化意义。我们的基因组为研究这种高度特化的硬骨鱼辐射进化历史的比较基因组学研究提供了有用的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb57/10932694/5d5430629bc7/ECE3-14-e11148-g003.jpg

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