Department of Sport and Exercise Science, College of Education, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, Zhejiang, P. R. China.
Department of Physics, Ningbo University, 818 Fenghua Road, Ningbo 315211, Zhejiang, P. R. China.
J Chem Inf Model. 2024 Apr 22;64(8):3386-3399. doi: 10.1021/acs.jcim.3c01929. Epub 2024 Mar 15.
Aggregation of tau protein into intracellular fibrillary inclusions is characterized as the hallmark of tauopathies, including Alzheimer's disease and chronic traumatic encephalopathy. The microtubule-binding (MTB) domain of tau, containing either three or four repeats with sequence similarities, plays an important role in determining tau's aggregation. Previous studies have reported that abnormal acetylation of lysine residues displays a distinct effect on the formation of pathological tau aggregates. However, the underlying molecular mechanism remains mostly elusive. In this study, we performed extensive replica exchange molecular dynamics (REMD) simulations of 144 μs in total to systematically investigate the dimerization of four tau MTB repeats and explore the impacts of Lys280 (K280) or Lys321 (K321) acetylation on the conformational ensembles of the R2 or R3 dimer. Our results show that R3 is the most prone to aggregation among the four repeats, followed by R2 and R4, while R1 displays the weakest aggregation propensity with a disordered structure. Acetylation of K280 could promote the aggregation of R2 peptides by increasing the formation of β-sheet structures and strengthening the interchain interaction. However, K321 acetylation decreases the β-sheet content of the R3 dimer, reduces the ability of R3 peptides to form long β-strands, and promotes the stable helix structure formation. The salt bridge and Y310-Y310 π-π stacking interactions of the R3 dimer are greatly weakened by K321 acetylation, resulting in the inhibition of dimerization. This study uncovers the structural ensembles of tau MTB repeats and provides mechanistic insights into the influences of acetylation on tau aggregation, which may deepen the understanding of the pathogenesis of tauopathies.
tau 蛋白聚集成细胞内纤维状包涵体是 tau 病的特征,包括阿尔茨海默病和慢性创伤性脑病。tau 的微管结合(MTB)域含有三个或四个重复序列,具有序列相似性,在决定 tau 的聚集中起着重要作用。先前的研究报告称,赖氨酸残基的异常乙酰化对病理性 tau 聚集的形成有明显的影响。然而,其潜在的分子机制在很大程度上仍不清楚。在这项研究中,我们进行了总计 144 μs 的广泛复制交换分子动力学(REMD)模拟,以系统地研究四个 tau MTB 重复的二聚化,并探讨赖氨酸 280(K280)或赖氨酸 321(K321)乙酰化对 R2 或 R3 二聚体构象集合的影响。我们的结果表明,在四个重复中,R3 最容易聚集,其次是 R2 和 R4,而 R1 则由于无序结构而具有最弱的聚集倾向。K280 的乙酰化可以通过增加β-折叠结构的形成和增强链间相互作用来促进 R2 肽的聚集。然而,K321 的乙酰化降低了 R3 二聚体的β-折叠含量,降低了 R3 肽形成长β-链的能力,并促进了稳定的螺旋结构形成。R3 二聚体的盐桥和 Y310-Y310π-π堆积相互作用由于 K321 的乙酰化而大大减弱,导致二聚体的抑制。这项研究揭示了 tau MTB 重复的结构集合,并提供了关于乙酰化对 tau 聚集影响的机制见解,这可能加深对 tau 病发病机制的理解。