Liang J H, Wang S Q, Zhang W F, Guo Y, Zhang Y, Chen F, Zhang L, Yin W B, Xiao L T, Jia S T
State Key Laboratory of Quantum Optics and Quantum Optics Devices, Institute of Laser Spectroscopy, Shanxi University, Taiyuan, China.
Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, China.
Biomed Opt Express. 2024 Feb 26;15(3):1878-1891. doi: 10.1364/BOE.517213. eCollection 2024 Mar 1.
Timely and accurate identification of harmful bacterial species in the environment is paramount for preventing the spread of diseases and ensuring food safety. In this study, laser-induced breakdown spectroscopy technology was utilized, combined with four machine learning methods - KNN, PCA-KNN, RF, and SVM, to conduct classification and identification research on 7 different types of bacteria, adhering to various substrate materials. The experimental results showed that despite the nearly identical elemental composition of these bacteria, differences in the intensity of elemental spectral lines provide crucial information for identification of bacteria. Under conditions of high-purity aluminum substrate, the identification rates of the four modeling methods reached 74.91%, 84.05%, 85.36%, and 96.07%, respectively. In contrast, under graphite substrate conditions, the corresponding identification rates reached 96.87%, 98.11%, 98.93%, and 100%. Graphite is found to be more suitable as a substrate material for bacterial classification, attributed to the fact that more characteristic spectral lines are excited in bacteria under graphite substrate conditions. Additionally, the emission spectral lines of graphite itself are relatively scarce, resulting in less interference with other elemental spectral lines of bacteria. Meanwhile, SVM exhibited the highest precision rate and recall rate, reaching up to 1, making it the most effective classification method in this experiment. This study provides a valuable approach for the rapid and accurate identification of bacterial species based on LIBS, as well as substrate selection, enhancing efficient microbial identification capabilities in fields related to social security and military applications.
及时准确地识别环境中的有害细菌种类对于预防疾病传播和确保食品安全至关重要。在本研究中,利用激光诱导击穿光谱技术,结合KNN、PCA-KNN、RF和SVM这四种机器学习方法,对附着于各种基底材料上的7种不同类型细菌进行分类识别研究。实验结果表明,尽管这些细菌的元素组成几乎相同,但元素光谱线强度的差异为细菌识别提供了关键信息。在高纯铝基底条件下,四种建模方法的识别率分别达到74.91%、84.05%、85.36%和96.07%。相比之下,在石墨基底条件下,相应的识别率分别达到96.87%、98.11%、98.93%和100%。发现石墨更适合作为细菌分类的基底材料,这是因为在石墨基底条件下细菌中激发了更多的特征光谱线。此外,石墨本身的发射光谱线相对较少,对细菌的其他元素光谱线干扰较小。同时,SVM表现出最高的精确率和召回率,高达1,使其成为本实验中最有效的分类方法。本研究为基于激光诱导击穿光谱的细菌种类快速准确识别以及基底选择提供了一种有价值的方法,增强了在社会保障和军事应用等领域的高效微生物识别能力。