Inaba Hiroaki, Shisaka Yuma, Ariyasu Shinya, Sakakibara Erika, Ueda Garyo, Aiba Yuichiro, Shimizu Nobutaka, Sugimoto Hiroshi, Shoji Osami
Department of Chemistry, School of Science, Nagoya University Furo-cho, Chikusa-ku Nagoya Aichi 464-0802 Japan
Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK) 1-1 Oho Tsukuba Ibaraki 305-0801 Japan.
RSC Adv. 2024 Mar 15;14(13):8829-8836. doi: 10.1039/d4ra01042f. eCollection 2024 Mar 14.
The use of biological host-guest interactions, specifically the binding of hemoprotein to heme, has attracted significant research interest in the design of artificial protein assemblies. However, because of the inherent flexibility of the propionic acid group of heme, it is difficult to control the positioning and orientation of the protein unit and to construct well-ordered structures. Herein, we report a heme-substituted protein dimer composed of the native hemoprotein HasA, which accommodates a tetraphenylporphyrin bearing an additional metal coordination site. The specific binding of the tetraphenylporphyrin with an additional metal coordination site that protrudes in a fixed direction confines the configuration of the dimer structure to a defined bent form. The small-angle X-ray scattering profile shows the dimer structure with a bent form and suggests dynamic rotational behavior while keeping its bent-core structure, resembling a bevel gear. This unique dimer structure demonstrates that the design of heme-substituted protein assemblies can be expanded to protein assemblies while maintaining the rotational freedom of the individual protein units.
生物宿主 - 客体相互作用的应用,特别是血红蛋白与血红素的结合,在人工蛋白质组装体的设计中引起了广泛的研究兴趣。然而,由于血红素丙酸基团固有的灵活性,很难控制蛋白质单元的定位和取向,也难以构建有序结构。在此,我们报道了一种由天然血红蛋白HasA组成的血红素取代的蛋白质二聚体,它容纳了一个带有额外金属配位位点的四苯基卟啉。带有在固定方向突出的额外金属配位位点的四苯基卟啉的特异性结合将二聚体结构的构型限制为特定的弯曲形式。小角X射线散射图谱显示出具有弯曲形式的二聚体结构,并表明其在保持弯曲核心结构的同时具有动态旋转行为,类似于锥齿轮。这种独特的二聚体结构表明,血红素取代的蛋白质组装体的设计可以扩展到蛋白质组装体,同时保持各个蛋白质单元的旋转自由度。