Department of Laboratory Medicine, The First Hospital of Jilin University, Changchun, 130021, China.
Center for Reproductive Medicine and Center for Prenatal Diagnosis, The First Hospital of Jilin University, Changchun, 130021, China.
Sci Rep. 2024 Mar 21;14(1):6813. doi: 10.1038/s41598-024-57533-w.
Thyroid carcinoma (THCA) is the most common endocrine cancer. Phosphodiesterase (PDE) 4 enzyme family, as specific regulator of cyclic adenosine monophosphate, may play a important role in THCA. However, few studies on PDE4 enzyme family in THCA have been reported yet. Therefore, this study aimed to systematically analyze the changes of PDE4 enzyme family in THCA, and look for potential target for THCA therapy. We systematically analyzed the expression differences, prognostic value, genetic alteration, methylation modification, and the correlation with tumor immune microenvironment of PDE4 family in THCA using several public databases, including TCGA, GEO, GSCA, TNMplot, cBioPortal, DiseaseMeth and TIMER. Besides, functional enrichment analysis and protein-protein interaction (PPI) network of PDE4 family was investigated using Metascape and STRING databases. The expression levels of PDE4A, PDE4B and PDE4D were down-regulated in THCA patients at different cancer stages, while the expression level of PDE4C was significantly up-regulated. Moreover, THCA patients with higher PDE4C expression had shorter progress free survival compared with those with lower PDE4C expression. The low genomic alteration frequencies and mildly increased methylation levels of PDE4 family were found in THCA patients. Except for PDE4A, the expression levels of PDE4B, PDE4C and PDE4D could affect many immune cells infiltration during THCA progression. Four PDE4 subtypes were all enriched in cAMP catabolic process. Nevertheless, PDE4C was not enriched in the cAMP binding signal pathway, and PDE4B was not enriched in the G alphas signaling events. Notably, PDE4C participated in cAMP metabolic process by regulating adenylate cyclases (ADCYs), which involved ADCY1, ADCY5, ADCY6, ADCY8 and ADCY9. The findings of this study provide a partial basis for the role of PDE4 family in the occurrence and development of THCA. In addition, this study also suggested that PDE4C might be a potential prognostic marker of THCA, which could serve as a reference for future basic and clinical research.
甲状腺癌(THCA)是最常见的内分泌癌。磷酸二酯酶(PDE)4 酶家族作为环磷酸腺苷的特异性调节剂,可能在 THCA 中发挥重要作用。然而,目前关于 THCA 中 PDE4 酶家族的研究较少。因此,本研究旨在系统分析 THCA 中 PDE4 酶家族的变化,并寻找 THCA 治疗的潜在靶点。我们系统地分析了 PDE4 家族在 THCA 中的表达差异、预后价值、遗传改变、甲基化修饰以及与肿瘤免疫微环境的相关性,使用了包括 TCGA、GEO、GSCA、TNMplot、cBioPortal、DiseaseMeth 和 TIMER 在内的多个公共数据库。此外,还使用 Metascape 和 STRING 数据库对 PDE4 家族的功能富集分析和蛋白质-蛋白质相互作用(PPI)网络进行了研究。在不同癌症阶段的 THCA 患者中,PDE4A、PDE4B 和 PDE4D 的表达水平下调,而 PDE4C 的表达水平显著上调。此外,PDE4C 表达较高的 THCA 患者无进展生存期较 PDE4C 表达较低的患者短。在 THCA 患者中,PDE4 家族的基因组改变频率较低,甲基化水平略有升高。除了 PDE4A 之外,PDE4B、PDE4C 和 PDE4D 的表达水平在 THCA 进展过程中可以影响许多免疫细胞的浸润。四种 PDE4 亚型都富集在 cAMP 分解代谢过程中。然而,PDE4C 没有富集在 cAMP 结合信号通路中,PDE4B 没有富集在 Gαs 信号事件中。值得注意的是,PDE4C 通过调节腺苷酸环化酶(ADCYs)参与 cAMP 代谢过程,其中涉及 ADCY1、ADCY5、ADCY6、ADCY8 和 ADCY9。本研究结果为 PDE4 家族在 THCA 的发生和发展中的作用提供了部分依据。此外,本研究还表明 PDE4C 可能是 THCA 的一个潜在预后标志物,可为未来的基础和临床研究提供参考。