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差异甲基化区域的综合网络分析,以研究孕期体重增加对母体代谢和胎儿-新生儿生长的影响。

Integrative network analysis of differentially methylated regions to study the impact of gestational weight gain on maternal metabolism and fetal-neonatal growth.

作者信息

Argentato Perla Pizzi, Guerra João Victor da Silva, Luzia Liania Alves, Ramos Ester Silveira, Maschietto Mariana, Rondó Patrícia Helen de Carvalho

机构信息

Universidade de São Paulo, Faculdade de Saúde Pública, Departamento de Nutrição, São Paulo, SP, Brazil.

Centro Nacional de Pesquisa em Energia e Materiais (CNPEM), Laboratório Nacional de Biociências (LNBio). Campinas, SP, Brazil.

出版信息

Genet Mol Biol. 2024 Mar 25;47(1):e20230203. doi: 10.1590/1678-4685-GMB-2023-0203. eCollection 2024.

Abstract

Integrative network analysis (INA) is important for identifying gene modules or epigenetically regulated molecular pathways in diseases. This study evaluated the effect of excessive gestational weight gain (EGWG) on INA of differentially methylated regions, maternal metabolism and offspring growth. Brazilian women from "The Araraquara Cohort Study" with adequate pre-pregnancy body mass index were divided into EGWG (n=30) versus adequate gestational weight gain (AGWG, n=45) groups. The methylome analysis was performed on maternal blood using the Illumina MethylationEPIC BeadChip. Fetal-neonatal growth was assessed by ultrasound and anthropometry, respectively. Maternal lipid and glycemic profiles were investigated. Maternal triglycerides-TG (p=0.030) and total cholesterol (p=0.014); fetus occipito-frontal diameter (p=0.005); neonate head circumference-HC (p=0.016) and thoracic perimeter (p=0.020) were greater in the EGWG compared to the AGWG group. Multiple linear regression analysis showed that maternal DNA methylation was associated with maternal TG and fasting insulin, fetal abdominal circumference, and fetal and neonate HC. The DMRs studied were enriched in 142 biological processes, 21 molecular functions,and 17 cellular components with terms directed for the fatty acids metabolism. Three DMGMs were identified:COL3A1, ITGA4 and KLRK1. INA targeted chronic diseases and maternal metabolism contributing to an epigenetic understanding of the involvement of GWG in maternal metabolism and fetal-neonatal growth.

摘要

整合网络分析(INA)对于识别疾病中的基因模块或表观遗传调控的分子途径很重要。本研究评估了孕期体重过度增加(EGWG)对差异甲基化区域的INA、母体代谢和后代生长的影响。来自“阿拉拉夸拉队列研究”且孕前体重指数合适的巴西女性被分为EGWG组(n = 30)和孕期体重增加适当(AGWG,n = 45)组。使用Illumina MethylationEPIC BeadChip对母体血液进行甲基化组分析。分别通过超声和人体测量学评估胎儿-新生儿生长情况。对母体的脂质和血糖状况进行了调查。与AGWG组相比,EGWG组的母体甘油三酯-TG(p = 0.030)和总胆固醇(p = 0.014);胎儿枕额径(p = 0.005);新生儿头围-HC(p = 0.016)和胸围(p = 0.020)更大。多元线性回归分析表明,母体DNA甲基化与母体TG、空腹胰岛素、胎儿腹围以及胎儿和新生儿HC相关。所研究的差异甲基化区域(DMRs)在142个生物学过程、21个分子功能和17个细胞成分中富集,这些术语都与脂肪酸代谢有关。鉴定出三个差异甲基化基因模块(DMGMs):COL3A1、ITGA4和KLRK1。INA针对慢性疾病和母体代谢,有助于从表观遗传学角度理解孕期体重增加(GWG)在母体代谢和胎儿-新生儿生长中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a34/10993311/426dad4068bc/1415-4757-GMB-47-1-e20230203-gf1.jpg

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