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Autobench V1.0:电子结构计算的基准测试自动化工具。

Autobench V1.0: Benchmarking Automation for Electronic Structure Calculations.

机构信息

Instituto de Química, Departamento de Química Orgânica, Universidade Estadual de Campinas, PO Box 6154, Campinas 13083-970, São Paulo, Brazil.

出版信息

J Chem Inf Model. 2024 Apr 22;64(8):3322-3331. doi: 10.1021/acs.jcim.4c00250. Epub 2024 Mar 27.

Abstract

This work reports on new software for automatic conformer energy benchmarking calculations for flexible molecules. The software workflow consists of four parts: conformational search, preoptimization, optimization, and frequency calculations at a higher level and last calculations using several theoretical levels. The software was written to be user-friendly and versatile to be used by nonexperts in computational chemistry. Any theoretical levels available in either Gaussian 16 or ORCA 5 may be applied in the benchmarking study. The workflow will automatically run conformational search calculations and deal with conformers that converge to the same minimum and those that show a negative frequency. At the end of the workflow, the user will have the mean absolute deviations and the most accurate method/DFT functional and basis set in comparison to the benchmark to be applied for the molecular system of interest. Case examples are given at the end of the paper that may help users to get insight into the software's main features.

摘要

本文介绍了一款用于自动构象能基准测试计算的新软件,适用于柔性分子。该软件的工作流程包括四个部分:构象搜索、预优化、优化和更高水平的频率计算,以及使用多个理论水平的最后计算。该软件旨在用户友好且多功能,供非计算化学专家使用。任何在 Gaussian 16 或 ORCA 5 中可用的理论水平都可以应用于基准研究。工作流程将自动运行构象搜索计算,并处理收敛到相同最小值的构象和显示负频率的构象。在工作流程结束时,用户将获得与基准相比的平均绝对偏差以及最准确的方法/DFT 功能和基组,以便应用于感兴趣的分子系统。本文末尾提供了一些案例示例,可帮助用户深入了解软件的主要功能。

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