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中国河南省家禽业分离菌株的抗菌药物耐药性及基因组特征

Antimicrobial Resistance and Genomic Characteristics of Strains Isolated from the Poultry Industry in Henan Province, China.

作者信息

Li Zugang, Jia Chaoying, Hu Zizhe, Jin Yancheng, Li Tianzhi, Zhang Xiaoxue, Peng Zhong, Yang Ruicheng, Chen Huanchun, Wang Xiangru

机构信息

National Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China.

Key Laboratory of Preventive Veterinary Medicine in Hubei Province, The Cooperative Innovation Center for Sustainable Pig Production, Wuhan 430070, China.

出版信息

Microorganisms. 2024 Mar 13;12(3):575. doi: 10.3390/microorganisms12030575.

Abstract

() is an important foodborne pathogen and a biomarker for monitoring antimicrobial resistance. Investigating the prevalence of in the poultry industry holds great importance, particularly in Henan province, a major poultry-producing region in China. Here, we investigated the antimicrobial resistance (AMR) phenotypes of strains obtained from the poultry industry in Henan, China. A total of 344 strains were isolated from 638 samples collected from seven farms, three slaughterhouses, and ten terminal markets. Approximately 96.4%, 81.7%, and 52.5% of the isolates from the farms, slaughterhouses, and terminal markets exhibited multidrug resistance. Whole-genome sequencing was performed on 169 strains to reveal their genomic characteristics. The sequence type (ST) analysis revealed that ST10 and ST156 were the most frequent types within the poultry supply chain, whereas ST10 and ST162 were commonly found across the farms, slaughterhouses, and terminal markets. Fourteen ST10 strains belonged to phylogenetic group A, while fifteen ST165 and six ST162 strains belonged to phylogenetic group B1. In addition, several antimicrobial resistance genes and virulence factor genes were identified. The gene mediated carbapenem resistance in two strains, while -mediated colistin resistance was detected in nine strains. Phylogenetic group A exhibited fewer virulence genes compared to other groups of . Plasmid replicons, such as IncFIB (AP001918), IncX1, IncFIC (FII), and IncFII (pHN7A8), were frequently observed. These findings provide valuable insights into the current AMR profiles of strains isolated from the poultry industry in Central China and highlight the need to implement good manufacturing practices and reduce antibiotic usage to mitigate potential risks associated with .

摘要

()是一种重要的食源性病原体,也是监测抗菌药物耐药性的生物标志物。调查其在家禽行业中的流行情况具有重要意义,尤其是在中国主要家禽产区河南省。在此,我们调查了从中国河南省家禽行业获得的()菌株的抗菌药物耐药(AMR)表型。总共从七个养殖场、三个屠宰场和十个终端市场采集的638份样本中分离出344株()菌株。来自养殖场、屠宰场和终端市场的分离株中,分别约有96.4%、81.7%和52.5%表现出多重耐药性。对169株菌株进行了全基因组测序以揭示其基因组特征。序列类型(ST)分析表明,ST10和ST156是家禽供应链中最常见的类型,而ST10和ST162在养殖场、屠宰场和终端市场中普遍存在。14株ST10()菌株属于系统发育组A,而15株ST165和6株ST162()菌株属于系统发育组B1。此外,还鉴定出了几种抗菌药物耐药基因和毒力因子基因。()基因介导了两株()菌株对碳青霉烯类的耐药性,而9株()菌株中检测到()介导的对黏菌素的耐药性。与其他()组相比,系统发育组A表现出较少的毒力基因。经常观察到质粒复制子,如IncFIB(AP001918)、IncX1、IncFIC(FII)和IncFII(pHN7A8)。这些发现为从中部地区家禽行业分离出的()菌株当前的AMR谱提供了有价值的见解,并强调需要实施良好生产规范并减少抗生素使用,以减轻与()相关的潜在风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78c2/10974558/0645032f2744/microorganisms-12-00575-g001.jpg

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