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[23位点芯片新生儿耳聋基因筛查的突变谱分析]

[Mutation spectrum analysis of 23-site chip neonatal deafness genetic screening].

作者信息

Ruan Yu, Cheng Xiaohua, Zhang Wei, Zhao Liping, Xie Jinge, Wen Cheng, Li Yue, Deng Lin, Huang Lihui

机构信息

Department of Otolaryngology Head and Neck Surgery,Beijing Tongren Hospital,Capital Medical University,Beijing Institute of Otolaryngology,Key Laboratory of Otolaryngology Head and Neck Surgery(Capital Medical University.

出版信息

Lin Chuang Er Bi Yan Hou Tou Jing Wai Ke Za Zhi. 2024 Apr;38(4):267-272. doi: 10.13201/j.issn.2096-7993.2024.04.001.

Abstract

To analyze the mutation spectrum of 23-site chip newborn deafness genetic screening in Beijing, and to provide basis for genetic counseling and clinical diagnosis and treatment. The study included 21 006 babies born in Beijing from December 2022 to June 2023. All subjects underwent newborn deafness genetic screening in Beijing Tongren Hospital, covering 23 variants in 4 genes, the gene(c.35delG, c.176_191del16, c.235delC, c.299_300delAT, c.109G>A, c.257C>G, c.512insAACG, c.427C>T, c.35insG), gene(c.919-2A>G, c.2168A>G, c.1174A>T, c.1226G>A, c.1229C>T, c.1975G>C, c.2027T>A, c.589G>A, c.1707+5G>A, c.917insG, c.281C>T), (m.1555A>G, m.1494C>T) and gene(c.538C>T). The mutation detection rate and allele frequency were analyzed. The overall mutation detection rate was 11.516%(2 419/21 006), with the gene being the most frequently involved at 9.097%(1 911/21 006), followed by the gene at 2.123%(446/21 006), the gene at 0.362%(76/21 006) and at 0.176%(37/21 006). Among the genes, c.109G>A and c.235delC mutation detection rates were the highest, with 6.579%(1 382/21 006) and 1.795%(377/21 006), respectively. Of the genes, c.919-2A>G and c.2168A>G had the highest mutation rates of 1.423%(299/21 006) and 0.233%(49/21 106), respectively. Regarding the allele frequency, c.109G>A was the most common variant with an allele frequency of 3.359%(1 411/42 012), followed by the c.235delC at 0.897%(377/42 012) and the c.919-2A>G at 0.719%(302/42 012). 23-site chip newborn deafness genetic screening in Beijing showed that c.109G>A mutation detection rate and allele frequency were the highest. This study has enriched the epidemiological data of 23-site chip genetic screening mutation profiles for neonatal deafness, which can provide evidence for clinical practice.

摘要

分析北京地区23位点芯片新生儿耳聋基因筛查的突变谱,为遗传咨询及临床诊疗提供依据。研究纳入2022年12月至2023年6月在北京出生的21006例婴儿。所有研究对象均在北京同仁医院接受新生儿耳聋基因筛查,覆盖4个基因的23个变异位点,分别为基因(c.35delG、c.176_191del16、c.235delC、c.299_300delAT、c.109G>A、c.257C>G、c.512insAACG、c.427C>T、c.35insG)、基因(c.919 - 2A>G、c.2168A>G、c.1174A>T、c.1226G>A、c.1229C>T、c.1975G>C、c.2027T>A、c.589G>A、c.1707 + 5G>A、c.917insG、c.281C>T)、(m.1555A>G、m.1494C>T)和基因(c.538C>T)。分析突变检出率及等位基因频率。总体突变检出率为11.516%(2419/21006),其中基因最常受累,为9.097%(1911/21006),其次是基因,为2.123%(446/21006),基因是0.362%(76/21006),为0.176%(37/21006)。在基因中,c.109G>A和c.235delC突变检出率最高,分别为6.579%(1382/21006)和1.795%(377/21006)。在基因中,c.919 - 2A>G和c.2168A>G突变率最高,分别为1.423%(299/21006)和0.233%(49/21106)。关于等位基因频率,c.109G>A是最常见的变异,等位基因频率为3.359%(1411/42012),其次是c.235delC,为0.897%(377/42012),c.919 - 2A>G为0.719%(302/42012)。北京地区23位点芯片新生儿耳聋基因筛查显示,c.109G>A突变检出率及等位基因频率最高。本研究丰富了23位点芯片新生儿耳聋基因筛查突变谱的流行病学数据,可为临床实践提供依据。

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