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Probabilistic partitioning methods to find significant patterns in ChIP-Seq data.
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A novel statistical method for quantitative comparison of multiple ChIP-seq datasets.
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Sensitive and robust assessment of ChIP-seq read distribution using a strand-shift profile.
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Continuous chromatin state feature annotation of the human epigenome.
Bioinformatics. 2022 May 26;38(11):3029-3036. doi: 10.1093/bioinformatics/btac283.
2
Segmentation and genome annotation algorithms for identifying chromatin state and other genomic patterns.
PLoS Comput Biol. 2021 Oct 14;17(10):e1009423. doi: 10.1371/journal.pcbi.1009423. eCollection 2021 Oct.
3
The molecular principles of gene regulation by Polycomb repressive complexes.
Nat Rev Mol Cell Biol. 2021 Dec;22(12):815-833. doi: 10.1038/s41580-021-00398-y. Epub 2021 Aug 16.
4
The dynamic broad epigenetic (H3K4me3, H3K27ac) domain as a mark of essential genes.
Clin Epigenetics. 2021 Jul 8;13(1):138. doi: 10.1186/s13148-021-01126-1.
5
Sustainable data analysis with Snakemake.
F1000Res. 2021 Jan 18;10:33. doi: 10.12688/f1000research.29032.2. eCollection 2021.
6
The epigenetic basis of cellular heterogeneity.
Nat Rev Genet. 2021 Apr;22(4):235-250. doi: 10.1038/s41576-020-00300-0. Epub 2020 Nov 26.
7
Advances in epigenetics link genetics to the environment and disease.
Nature. 2019 Jul;571(7766):489-499. doi: 10.1038/s41586-019-1411-0. Epub 2019 Jul 24.
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Segway 2.0: Gaussian mixture models and minibatch training.
Bioinformatics. 2018 Feb 15;34(4):669-671. doi: 10.1093/bioinformatics/btx603.
9
10
Multi-scale chromatin state annotation using a hierarchical hidden Markov model.
Nat Commun. 2017 Apr 7;8:15011. doi: 10.1038/ncomms15011.

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