• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

肺纤维化的新分子机制:单细胞 RNA-seq 数据库再分析揭示脂质代谢。

The novel molecular mechanism of pulmonary fibrosis: insight into lipid metabolism from reanalysis of single-cell RNA-seq databases.

机构信息

Department of Dermatology, Huashan Hospital, and State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.

Human Phenome Institute, and Collaborative Innovation Center for Genetics and Development, Fudan University, Shanghai, China Fudan University, Shanghai, China.

出版信息

Lipids Health Dis. 2024 Apr 3;23(1):98. doi: 10.1186/s12944-024-02062-8.

DOI:10.1186/s12944-024-02062-8
PMID:38570797
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10988923/
Abstract

Pulmonary fibrosis (PF) is a severe pulmonary disease with limited available therapeutic choices. Recent evidence increasingly points to abnormal lipid metabolism as a critical factor in PF pathogenesis. Our latest research identifies the dysregulation of low-density lipoprotein (LDL) is a new risk factor for PF, contributing to alveolar epithelial and endothelial cell damage, and fibroblast activation. In this study, we first integrative summarize the published literature about lipid metabolite changes found in PF, including phospholipids, glycolipids, steroids, fatty acids, triglycerides, and lipoproteins. We then reanalyze two single-cell RNA-sequencing (scRNA-seq) datasets of PF, and the corresponding lipid metabolomic genes responsible for these lipids' biosynthesis, catabolism, transport, and modification processes are uncovered. Intriguingly, we found that macrophage is the most active cell type in lipid metabolism, with almost all lipid metabolic genes being altered in macrophages of PF. In type 2 alveolar epithelial cells, lipid metabolic differentially expressed genes (DEGs) are primarily associated with the cytidine diphosphate diacylglycerol pathway, cholesterol metabolism, and triglyceride synthesis. Endothelial cells are partly responsible for sphingomyelin, phosphatidylcholine, and phosphatidylethanolamines reprogramming as their metabolic genes are dysregulated in PF. Fibroblasts may contribute to abnormal cholesterol, phosphatidylcholine, and phosphatidylethanolamine metabolism in PF. Therefore, the reprogrammed lipid profiles in PF may be attributed to the aberrant expression of lipid metabolic genes in different cell types. Taken together, these insights underscore the potential of targeting lipid metabolism in developing innovative therapeutic strategies, potentially leading to extended overall survival in individuals affected by PF.

摘要

肺纤维化(PF)是一种严重的肺部疾病,可供选择的治疗方法有限。最近的证据越来越多地指出,异常的脂质代谢是 PF 发病机制的一个关键因素。我们的最新研究确定了低密度脂蛋白(LDL)的失调是 PF 的一个新的风险因素,导致肺泡上皮细胞和内皮细胞损伤以及成纤维细胞激活。在这项研究中,我们首先综合总结了关于 PF 中发现的脂质代谢物变化的已发表文献,包括磷脂、糖脂、类固醇、脂肪酸、甘油三酯和脂蛋白。然后,我们重新分析了两个 PF 的单细胞 RNA 测序(scRNA-seq)数据集,发现了负责这些脂质生物合成、分解代谢、运输和修饰过程的脂质代谢基因。有趣的是,我们发现巨噬细胞是脂质代谢最活跃的细胞类型,PF 中的巨噬细胞几乎改变了所有脂质代谢基因。在 2 型肺泡上皮细胞中,脂质代谢差异表达基因(DEGs)主要与胞苷二磷酸二酰基甘油途径、胆固醇代谢和甘油三酯合成有关。内皮细胞部分负责鞘磷脂、磷脂酰胆碱和磷脂酰乙醇胺的重新编程,因为它们的代谢基因在 PF 中失调。成纤维细胞可能导致 PF 中胆固醇、磷脂酰胆碱和磷脂酰乙醇胺代谢异常。因此,PF 中重编程的脂质谱可能归因于不同细胞类型中脂质代谢基因的异常表达。总之,这些见解强调了靶向脂质代谢在开发创新治疗策略中的潜力,可能导致 PF 患者的总体生存期延长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/d75d03f53de5/12944_2024_2062_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/c268403cdfc5/12944_2024_2062_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/2cd9bd395a0c/12944_2024_2062_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/8c8b002dad20/12944_2024_2062_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/f5c596842048/12944_2024_2062_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/d75d03f53de5/12944_2024_2062_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/c268403cdfc5/12944_2024_2062_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/2cd9bd395a0c/12944_2024_2062_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/8c8b002dad20/12944_2024_2062_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/f5c596842048/12944_2024_2062_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0044/10988923/d75d03f53de5/12944_2024_2062_Fig5_HTML.jpg

相似文献

1
The novel molecular mechanism of pulmonary fibrosis: insight into lipid metabolism from reanalysis of single-cell RNA-seq databases.肺纤维化的新分子机制:单细胞 RNA-seq 数据库再分析揭示脂质代谢。
Lipids Health Dis. 2024 Apr 3;23(1):98. doi: 10.1186/s12944-024-02062-8.
2
Reexamining the Role of Pulmonary Lipids in the Pathogenesis of Pulmonary Fibrosis.重新审视肺脂质在肺纤维化发病机制中的作用。
Am J Respir Cell Mol Biol. 2024 Oct;71(4):407-419. doi: 10.1165/rcmb.2024-0124PS.
3
A pneumocyte-macrophage paracrine lipid axis drives the lung toward fibrosis.肺上皮细胞-巨噬细胞旁分泌脂质轴促使肺部走向纤维化。
Am J Respir Cell Mol Biol. 2015 Jul;53(1):74-86. doi: 10.1165/rcmb.2014-0343OC.
4
LDLR dysfunction induces LDL accumulation and promotes pulmonary fibrosis.LDLR 功能障碍导致 LDL 积累并促进肺纤维化。
Clin Transl Med. 2022 Jan;12(1):e711. doi: 10.1002/ctm2.711.
5
Drp1-mediated mitochondrial fission promotes pulmonary fibrosis progression through the regulation of lipid metabolic reprogramming by ROS/HIF-1α.动力相关蛋白1(Drp1)介导的线粒体分裂通过活性氧(ROS)/缺氧诱导因子-1α(HIF-1α)调节脂质代谢重编程促进肺纤维化进展。
Cell Signal. 2024 May;117:111075. doi: 10.1016/j.cellsig.2024.111075. Epub 2024 Feb 2.
6
The role of macrophage polarization and cellular crosstalk in the pulmonary fibrotic microenvironment: a review.巨噬细胞极化及细胞串扰在肺纤维化微环境中的作用:综述。
Cell Commun Signal. 2024 Mar 9;22(1):172. doi: 10.1186/s12964-024-01557-2.
7
Roles of lipid metabolism and its regulatory mechanism in idiopathic pulmonary fibrosis: A review.脂质代谢在特发性肺纤维化中的作用及其调控机制:综述
Int J Biochem Cell Biol. 2023 Feb;155:106361. doi: 10.1016/j.biocel.2022.106361. Epub 2022 Dec 31.
8
Dysregulation of lipid metabolism in Tangier monocyte-derived macrophages.丹吉尔单核细胞衍生巨噬细胞中脂质代谢的失调。
Arteriosclerosis. 1990 Nov-Dec;10(6):1010-9. doi: 10.1161/01.atv.10.6.1010.
9
Bronchoalveolar lavage lipids during development of bleomycin-induced fibrosis in rats. Relationship to altered epithelial cell morphology.博来霉素诱导的大鼠肺纤维化发展过程中的支气管肺泡灌洗脂质。与上皮细胞形态改变的关系。
Am Rev Respir Dis. 1988 Sep;138(3):709-13. doi: 10.1164/ajrccm/138.3.709.
10
The role of intranuclear lipids.核内脂质的作用。
Biol Cell. 2004 Oct;96(8):657-67. doi: 10.1016/j.biolcel.2004.05.004.

引用本文的文献

1
Targeting alveolar epithelial cell metabolism in pulmonary fibrosis: Pioneering an emerging therapeutic strategy.靶向肺纤维化中的肺泡上皮细胞代谢:开拓一种新兴治疗策略。
Front Cell Dev Biol. 2025 Jun 25;13:1608750. doi: 10.3389/fcell.2025.1608750. eCollection 2025.
2
Alteration of Lipid Metabolism in Patients with IPF and Its Association with Disease Severity and Prognosis: A Case-Control Study.特发性肺纤维化患者脂质代谢的改变及其与疾病严重程度和预后的关系:一项病例对照研究
Int J Mol Sci. 2025 Jun 17;26(12):5790. doi: 10.3390/ijms26125790.
3
Macrophage Polarization: Learning to Manage It 3.0.

本文引用的文献

1
Precision medicine advances in idiopathic pulmonary fibrosis.特发性肺纤维化的精准医学进展。
EBioMedicine. 2023 Sep;95:104766. doi: 10.1016/j.ebiom.2023.104766. Epub 2023 Aug 23.
2
Characterizing cancer metabolism from bulk and single-cell RNA-seq data using METAFlux.使用 METAFlux 从批量和单细胞 RNA-seq 数据中描绘癌症代谢。
Nat Commun. 2023 Aug 12;14(1):4883. doi: 10.1038/s41467-023-40457-w.
3
Global incidence, prevalence and disease burden of silicosis: 30 years' overview and forecasted trends.全球矽肺发病率、患病率和疾病负担:30 年概述及预测趋势。
巨噬细胞极化:学会掌控它3.0
Int J Mol Sci. 2025 Jan 1;26(1):311. doi: 10.3390/ijms26010311.
4
Unlocking lung regeneration: insights into progenitor cell dynamics and metabolic control.解锁肺再生:对祖细胞动力学和代谢控制的见解。
Cell Regen. 2024 Dec 16;13(1):31. doi: 10.1186/s13619-024-00212-y.
5
Untargeted Blood Lipidomics Analysis in Critically Ill Pediatric Patients with Ventilator-Associated Pneumonia: A Pilot Study.危重症小儿呼吸机相关性肺炎患者的非靶向血脂组学分析:一项初步研究
Metabolites. 2024 Aug 23;14(9):466. doi: 10.3390/metabo14090466.
6
Pulmonary fibrosis: pathogenesis and therapeutic strategies.肺纤维化:发病机制与治疗策略。
MedComm (2020). 2024 Sep 23;5(10):e744. doi: 10.1002/mco2.744. eCollection 2024 Oct.
7
Exploring ABHD5 as a Lipid-Related Biomarker in Idiopathic Pulmonary Fibrosis: Integrating Machine Learning, Bioinformatics, and In Vitro Experiments.探索ABHD5作为特发性肺纤维化中与脂质相关的生物标志物:整合机器学习、生物信息学和体外实验
Inflammation. 2024 Jul 24. doi: 10.1007/s10753-024-02107-1.
BMC Public Health. 2023 Jul 17;23(1):1366. doi: 10.1186/s12889-023-16295-2.
4
The Role of Pulmonary Surfactant Phospholipids in Fibrotic Lung Diseases.肺表面活性物质磷脂在肺纤维化疾病中的作用。
Int J Mol Sci. 2022 Dec 25;24(1):326. doi: 10.3390/ijms24010326.
5
Lung cancer in patients with idiopathic pulmonary fibrosis: A retrospective multicentre study in Europe.特发性肺纤维化患者中的肺癌:欧洲的一项回顾性多中心研究。
Respirology. 2023 Jan;28(1):56-65. doi: 10.1111/resp.14363. Epub 2022 Sep 18.
6
Human distal airways contain a multipotent secretory cell that can regenerate alveoli.人类远端气道中存在一种多能分泌细胞,它可以再生肺泡。
Nature. 2022 Apr;604(7904):120-126. doi: 10.1038/s41586-022-04552-0. Epub 2022 Mar 30.
7
Mineralocorticoid Receptor Antagonist (Potassium Canrenoate) Does Not Influence Outcome in the Treatment of COVID-19-Associated Pneumonia and Fibrosis-A Randomized Placebo Controlled Clinical Trial.盐皮质激素受体拮抗剂(坎利酸钾)对新型冠状病毒肺炎相关肺炎和纤维化治疗结局无影响——一项随机安慰剂对照临床试验
Pharmaceuticals (Basel). 2022 Feb 5;15(2):200. doi: 10.3390/ph15020200.
8
Lung cancer scRNA-seq and lipidomics reveal aberrant lipid metabolism for early-stage diagnosis.肺癌单细胞RNA测序和脂质组学揭示异常脂质代谢用于早期诊断。
Sci Transl Med. 2022 Feb 2;14(630):eabk2756. doi: 10.1126/scitranslmed.abk2756.
9
Fatty Acid Metabolism and Idiopathic Pulmonary Fibrosis.脂肪酸代谢与特发性肺纤维化
Front Physiol. 2022 Jan 14;12:794629. doi: 10.3389/fphys.2021.794629. eCollection 2021.
10
LDLR dysfunction induces LDL accumulation and promotes pulmonary fibrosis.LDLR 功能障碍导致 LDL 积累并促进肺纤维化。
Clin Transl Med. 2022 Jan;12(1):e711. doi: 10.1002/ctm2.711.