Biological and Chemical Investigations, State Forensic Science Bureau, 1 Invalidu street, Riga LV-1013, Latvia.
Forensic Sci Int. 2024 May;358:112007. doi: 10.1016/j.forsciint.2024.112007. Epub 2024 Mar 24.
While plant species identification in forensics can be useful in cases involving poisonous, psychoactive, or endangered plant species, it can also become quite challenging, especially, when dealing with processed, decaying, colonized or infected material of plant origin. The Animal Plant and Soil Traces expert working group of the European Network of Forensic Science Institutes in their best practice manual has recommended several markers for plant species identification. Current study is a part of implementation of method in a forensic laboratory and its aim is to evaluate four of the recommended markers (ITS, matK, rbcL, and trnH-psbA) for species identification of forensically important plant species including medicinal, poisonous, psychoactive, and other plants. Such parameters as PCR and sequencing success, sequence length, species resolution rate and species cover in GenBank were analysed. Blind testing was performed to evaluate use of the markers for identification of forensically more complicated samples. According to results, a combination of ITS, matK and trnH-psbA is the best choice for plant species identification. The best results with fresh plant material can be achieved with ITS, trnH-psbA, and matK, while ITS and matK are the best choice when working with low quality plant material. rbcL due to its low species discrimination rate can be used only as an indicative marker.
在法医学中进行植物物种鉴定可能在涉及有毒、精神活性或濒危植物物种的情况下很有用,但当涉及到加工、腐烂、定植或感染的植物来源材料时,也会变得极具挑战性。欧洲法医学研究所网络的动植物和土壤痕迹专家工作组在其最佳实践手册中推荐了几种用于植物物种鉴定的标记物。本研究是在法医实验室实施该方法的一部分,其目的是评估为法医学重要的植物物种(包括药用、有毒、精神活性和其他植物)鉴定推荐的四种标记物(ITS、matK、rbcL 和 trnH-psbA)。分析了 PCR 和测序成功率、序列长度、物种分辨率率和 GenBank 中的物种覆盖率等参数。进行了盲测以评估这些标记物在鉴定更复杂的法医样本中的用途。结果表明,ITS、matK 和 trnH-psbA 的组合是植物物种鉴定的最佳选择。对于新鲜植物材料,可以通过 ITS、trnH-psbA 和 matK 获得最佳结果,而对于低质量植物材料,ITS 和 matK 是最佳选择。rbcL 由于其低物种区分率,只能用作指示标记物。