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有机可溶性DNA(osDNA)的可逆且完全可控生成

Reversible and Fully Controllable Generation of Organo-Soluble DNA (osDNA).

作者信息

Siripuram Vijay Kumar, Sunkari Yashoda Krishna, Ma Fei, Nguyen Thu-Lan, Flajolet Marc

机构信息

Laboratory of Molecular and Cellular Neuroscience, The Rockefeller University, 1230 York Avenue, New York City, New York 10065, United States.

出版信息

ACS Omega. 2024 Mar 19;9(13):14771-14780. doi: 10.1021/acsomega.3c06755. eCollection 2024 Apr 2.

Abstract

The present work describes a complete and reversible transformation of DNA's properties allowing solubilization in organic solvents and subsequent chemical modifications that are otherwise not possible in an aqueous medium. Organo-soluble DNA (osDNA) moieties are generated by covalently linking a dsDNA fragment to a polyether moiety with a built-in mechanism, rendering the process perfectly reversible and fully controllable. The precise removal of the polyether moiety frees up the initial DNA fragment, unaltered, both in sequence and nature. The solubility of osDNA was confirmed in six organic solvents of decreasing polarity and six types of osDNAs. As a proof of concept, in the context of DNA-encoded library (DEL) technology, an amidation reaction was successfully performed on osDNA in 100% DMSO. The development of osDNA opens up entirely new avenues for any DNA applications that could benefit from working in nonaqueous solutions, including chemical transformations.

摘要

本研究描述了DNA性质的一种完全可逆的转变,使其能够溶解于有机溶剂,并进行后续的化学修饰,而这些修饰在水性介质中是无法实现的。通过将双链DNA片段与带有内置机制的聚醚部分共价连接,生成可溶于有机相的DNA(osDNA)部分,使该过程完全可逆且完全可控。精确去除聚醚部分后,初始DNA片段在序列和性质上均保持不变。在六种极性递减的有机溶剂和六种类型的osDNA中证实了osDNA的溶解性。作为概念验证,在DNA编码文库(DEL)技术的背景下,在100%二甲基亚砜中成功地对osDNA进行了酰胺化反应。osDNA的发展为任何可受益于在非水溶液中进行操作(包括化学转化)的DNA应用开辟了全新的途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/88f8/10993399/d71678095ce4/ao3c06755_0001.jpg

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