Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan.
Top Global University Program, Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan.
Proc Natl Acad Sci U S A. 2024 Apr 16;121(16):e2311390121. doi: 10.1073/pnas.2311390121. Epub 2024 Apr 9.
Many organisms that utilize the Calvin-Benson-Bassham (CBB) cycle for autotrophic growth harbor metabolic pathways to remove and/or salvage 2-phosphoglycolate, the product of the oxygenase activity of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). It has been presumed that the occurrence of 2-phosphoglycolate salvage is linked to the CBB cycle, and in particular, the C2 pathway to the CBB cycle and oxygenic photosynthesis. Here, we examined 2-phosphoglycolate salvage in the hyperthermophilic archaeon , an obligate anaerobe that harbors a Rubisco that functions in the pentose bisphosphate pathway. harbors enzymes that have the potential to convert 2-phosphoglycolate to glycine and serine, and their genes were identified by biochemical and/or genetic analyses. 2-phosphoglycolate phosphatase activity increased 1.6-fold when cells were grown under microaerobic conditions compared to anaerobic conditions. Among two candidates, TK1734 encoded a phosphatase specific for 2-phosphoglycolate, and the enzyme was responsible for 80% of the 2-phosphoglycolate phosphatase activity in cells. The TK1734 disruption strain displayed growth impairment under microaerobic conditions, which was relieved upon addition of sodium sulfide. In addition, glycolate was detected in the medium when was grown under microaerobic conditions. The results suggest that removes 2-phosphoglycolate via a phosphatase reaction followed by secretion of glycolate to the medium. As the Rubisco in functions in the pentose bisphosphate pathway and not in the CBB cycle, mechanisms to remove 2-phosphoglycolate in this archaeon emerged independent of the CBB cycle.
许多利用卡尔文-本森-巴斯汉姆(CBB)循环进行自养生长的生物都拥有代谢途径来去除和/或回收 2-磷酸甘油酸,2-磷酸甘油酸是核酮糖-1,5-二磷酸羧化酶/加氧酶(Rubisco)的加氧酶活性的产物。人们推测,2-磷酸甘油酸的回收发生与 CBB 循环有关,特别是 C2 途径与 CBB 循环和需氧光合作用有关。在这里,我们研究了高温古菌中的 2-磷酸甘油酸回收,这是一种专性厌氧菌,它拥有一种在戊糖二磷酸途径中发挥作用的 Rubisco。 拥有将 2-磷酸甘油酸转化为甘氨酸和丝氨酸的潜在酶,并且通过生化和/或遗传分析鉴定了它们的基因。与厌氧条件相比,当细胞在微氧条件下生长时,2-磷酸甘油酸磷酸酶活性增加了 1.6 倍。在两个候选物中,TK1734 编码了一种对 2-磷酸甘油酸特异的磷酸酶,并且该酶负责 细胞中 2-磷酸甘油酸磷酸酶活性的 80%。TK1734 缺失菌株在微氧条件下表现出生长受损,当添加亚硫酸钠时,这种情况得到缓解。此外,当 在微氧条件下生长时,在培养基中检测到了乙二醇酸。结果表明, 通过磷酸酶反应去除 2-磷酸甘油酸,然后将乙二醇酸分泌到培养基中。由于 中的 Rubisco 在戊糖二磷酸途径中而不是在 CBB 循环中起作用,因此该古菌中去除 2-磷酸甘油酸的机制独立于 CBB 循环出现。