Rahman Md Sojiur, Hosen Md Eram, Faruqe Md Omar, Khalekuzzaman Md, Islam Md Asadul, Acharjee Uzzal Kumar, Bin Jardan Yousef A, Nafidi Hiba-Allah, Mekonnen Amare Bitew, Bourhia Mohammed, Zaman Rashed
Professor Joarder DNA and Chromosome Research Laboratory, Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi, Bangladesh.
Department of Computer Science and Engineering, University of Rajshahi, Rajshahi, Bangladesh.
Front Mol Biosci. 2024 Mar 27;10:1278701. doi: 10.3389/fmolb.2023.1278701. eCollection 2023.
is a medicinal plant with numerous potential secondary metabolites showing a significant level of antidiabetic activity. The objective of the current study was to identify potential phytochemicals from the methanolic leaf extract of as therapeutic agents against diabetes mellitus using GC-MS and methods. The GC-MS analysis of the leaf extract revealed a total of 17 phytochemicals. Molecular docking was performed using these phytochemicals, targeting the mutated insulin receptor tyrosine kinase (5hhw), which inhibits glucose uptake by cells. Diazoprogesterone (-9.2 kcal/mol), 2,4,4,7a-Tetramethyl-1-(3-oxobutyl)octahydro-1H-indene-2-carboxylic acid (-6.9 kcal/mol), and 2-Naphthalenemethanol, decahydro-.alpha.,.alpha.,4a-trimethyl-8-methylene-, [2R-(2.alpha.,4a.alpha.,8a.beta.)] (-6.6 kcal/mol) exhibited better binding with the target protein. The ADMET analysis was performed for the top three compounds with the best docking scores, which showed positive results with no observed toxicity in the AMES test. Furthermore, the molecular dynamics study confirmed the favorable binding of Diazoprogesterone, 2,4,4,7a-Tetramethyl-1-(3-oxobutyl)octahydro-1H-indene-2-carboxylic acid and 2-Naphthalenemethanol, decahydro-.alpha.,.alpha.,4a-trimethyl-8-methylene-, [2R-(2.alpha.,4a.alpha.,8a.beta.)] with the receptor throughout the 100 ns simulation period.
是一种药用植物,含有多种潜在的次生代谢产物,具有显著水平的抗糖尿病活性。本研究的目的是使用气相色谱 - 质谱联用(GC - MS)和[此处原文缺失相关方法名称]方法,从[此处原文缺失植物名称]的甲醇叶提取物中鉴定出潜在的植物化学物质作为抗糖尿病的治疗剂。叶提取物的GC - MS分析共鉴定出17种植物化学物质。使用这些植物化学物质进行分子对接,以突变的胰岛素受体酪氨酸激酶(5hhw)为靶点,该激酶抑制细胞对葡萄糖的摄取。重氮孕酮(-9.2千卡/摩尔)、2,4,4,7a - 四甲基 - 1 - (3 - 氧代丁基)八氢 - 1H - 茚 - 2 - 羧酸(-6.9千卡/摩尔)和十氢 - α,α,4a - 三甲基 - 8 - 亚甲基 - 2 - 萘甲醇,[2R - (2α.,4aα.,8aβ.)](-6.6千卡/摩尔)与目标蛋白表现出更好的结合。对对接分数最佳的前三种化合物进行了药物代谢及毒性预测(ADMET)分析,结果显示在AMES试验中未观察到毒性,结果呈阳性。此外,分子动力学研究证实了重氮孕酮、2,4,4,7a - 四甲基 - 1 - (3 - 氧代丁基)八氢 - 1H - 茚 - 2 - 羧酸和十氢 - α,α,4a - 三甲基 - 8 - 亚甲基 - 2 - 萘甲醇,[2R - (2α.,4aα.,8aβ.)]在整个100纳秒的模拟期内与受体具有良好的结合。