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基于机器学习的斯皮茨样肿瘤组织学解读:改善决策的广泛一致性分析。

Histological interpretation of spitzoid tumours: an extensive machine learning-based concordance analysis for improving decision making.

机构信息

Universitat de València, Valencia, Spain.

INCLIVA, Instituto de Investigación Sanitaria, Valencia, Spain.

出版信息

Histopathology. 2024 Jul;85(1):155-170. doi: 10.1111/his.15187. Epub 2024 Apr 12.

DOI:10.1111/his.15187
PMID:38606989
Abstract

The histopathological classification of melanocytic tumours with spitzoid features remains a challenging task. We confront the complexities involved in the histological classification of these tumours by proposing machine learning (ML) algorithms that objectively categorise the most relevant features in order of importance. The data set comprises 122 tumours (39 benign, 44 atypical and 39 malignant) from four different countries. BRAF and NRAS mutation status was evaluated in 51. Analysis of variance score was performed to rank 22 clinicopathological variables. The Gaussian naive Bayes algorithm achieved in distinguishing Spitz naevus from malignant spitzoid tumours with an accuracy of 0.95 and kappa score of 0.87, utilising the 12 most important variables. For benign versus non-benign Spitz tumours, the test reached a kappa score of 0.88 using the 13 highest-scored features. Furthermore, for the atypical Spitz tumours (AST) versus Spitz melanoma comparison, the logistic regression algorithm achieved a kappa value of 0.66 and an accuracy rate of 0.85. When the three categories were compared most AST were classified as melanoma, because of the similarities on histological features between the two groups. Our results show promise in supporting the histological classification of these tumours in clinical practice, and provide valuable insight into the use of ML to improve the accuracy and objectivity of this process while minimising interobserver variability. These proposed algorithms represent a potential solution to the lack of a clear threshold for the Spitz/spitzoid tumour classification, and its high accuracy supports its usefulness as a helpful tool to improve diagnostic decision-making.

摘要

具有 Spitz 样特征的黑色素细胞肿瘤的组织病理学分类仍然是一项具有挑战性的任务。我们通过提出机器学习 (ML) 算法来应对这些肿瘤组织学分类的复杂性,这些算法可以客观地按重要性顺序对最相关的特征进行分类。该数据集包含来自四个不同国家的 122 个肿瘤(39 个良性、44 个非典型和 39 个恶性)。评估了 51 个 BRAF 和 NRAS 突变状态。进行方差得分分析以对 22 个临床病理变量进行排名。高斯朴素贝叶斯算法在区分 Spitz 痣和恶性 Spitz 样肿瘤方面达到了 0.95 的准确性和 0.87 的kappa 评分,使用了 12 个最重要的变量。对于良性与非良性 Spitz 肿瘤,使用 13 个得分最高的特征,测试达到了 0.88 的 kappa 评分。此外,对于非典型 Spitz 肿瘤 (AST) 与 Spitz 黑色素瘤的比较,逻辑回归算法达到了 0.66 的 kappa 值和 0.85 的准确率。当比较这三个类别时,由于两组之间在组织学特征上的相似性,大多数 AST 被归类为黑色素瘤。我们的结果有望支持这些肿瘤在临床实践中的组织学分类,并为使用 ML 提高该过程的准确性和客观性提供有价值的见解,同时最大限度地减少观察者间的变异性。这些提出的算法代表了解决 Spitz/spitzoid 肿瘤分类缺乏明确阈值的潜在解决方案,其高准确性支持其作为改善诊断决策有用工具的用途。

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Histological interpretation of spitzoid tumours: an extensive machine learning-based concordance analysis for improving decision making.基于机器学习的斯皮茨样肿瘤组织学解读:改善决策的广泛一致性分析。
Histopathology. 2024 Jul;85(1):155-170. doi: 10.1111/his.15187. Epub 2024 Apr 12.
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