Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
Faculty of Biology, Lomonosov Moscow State University, Moscow, 119234, Russia.
Biochemistry (Mosc). 2024 Feb;89(2):371-376. doi: 10.1134/S0006297924020159.
The article describes the history of studies of survival data carried out at the Research Institute of Physico-Chemical Biology under the leadership of Academician V. P. Skulachev from 1970s until present, with special emphasis on the last decade. The use of accelerated failure time (AFT) model and analysis of coefficient of variation of lifespan (CV) in addition to the Gompertz methods of analysis, allows to assess survival curves for the presence of temporal scaling (i.e., manifestation of accelerated aging), without changing the shape of survival curve with the same coefficient of variation. A modification of the AFT model that uses temporal scaling as the null hypothesis made it possible to distinguish between the quantitative and qualitative differences in the dynamics of aging. It was also shown that it is possible to compare the data on the survival of species characterized by the survival curves of the original shape (i.e., "flat" curves without a pronounced increase in the probability of death with age typical of slowly aging species), when considering the distribution of lifespan as a statistical random variable and comparing parameters of such distribution. Thus, it was demonstrated that the higher impact of mortality caused by external factors (background mortality) in addition to the age-dependent mortality, the higher the disorder of mortality values and the greater its difference from the calculated value characteristic of developed countries (15-20%). For comparison, CV for the Paraguayan Ache Indians is 100% (57% if we exclude prepuberty individuals as suggested by Jones et al.). According to Skulachev, the next step is considering mortality fluctuations as a measure for the disorder of survival data. Visual evaluation of survival curves can already provide important data for subsequent analysis. Thus, Sokolov and Severin [1] found that mutations have different effects on the shape of survival curves. Type I survival curves generally retains their standard convex rectangular shape, while type II curves demonstrate a sharp increase in the mortality which makes them similar to a concave exponential curve with a stably high mortality rate. It is noteworthy that despite these differences, mutations in groups I and II are of a similar nature. They are associated (i) with "DNA metabolism" (DNA repair, transcription, and replication); (ii) protection against oxidative stress, associated with the activity of the transcription factor Nrf2, and (iii) regulation of proliferation, and (or these categories may overlap). However, these different mutations appear to produce the same result at the organismal level, namely, accelerated aging according to the Gompertz's law. This might be explained by the fact that all these mutations, each in its own unique way, either reduce the lifespan of cells or accelerate their transition to the senescent state, which supports the concept of Skulachev on the existence of multiple pathways of aging (chronic phenoptosis).
本文描述了 20 世纪 70 年代以来,在 V. P. Skulachev 院士领导下的物理化学生物学研究所进行的生存数据分析研究的历史,特别强调了过去十年的研究。使用加速失效时间(AFT)模型和分析寿命变异系数(CV),除了使用 Gompertz 分析方法之外,还可以评估生存曲线是否存在时间缩放(即加速衰老的表现),而不改变生存曲线的形状,同时保持相同的 CV。AFT 模型的一个修改版本,使用时间缩放作为零假设,使得能够区分衰老动力学的定量和定性差异。还表明,可以比较具有原始形状的生存曲线的物种(即没有明显增加与年龄相关的死亡概率的“平坦”曲线,这是缓慢衰老物种的典型特征)的生存数据,将寿命分布视为统计随机变量,并比较这种分布的参数。因此,已经证明,除了年龄相关的死亡率之外,由外部因素(背景死亡率)引起的死亡率更高,死亡率值的混乱程度更高,并且与发达国家(15-20%)的计算值的差异更大。相比之下,巴拉圭阿切印第安人的 CV 为 100%(如果按照 Jones 等人的建议排除青春期前个体,则为 57%)。根据 Skulachev 的说法,下一步是将死亡率波动视为生存数据混乱的衡量标准。对生存曲线的直观评估已经可以为后续分析提供重要数据。因此,Sokolov 和 Severin [1] 发现,突变对生存曲线的形状有不同的影响。I 型生存曲线通常保持其标准的凸矩形形状,而 II 型曲线则表现出死亡率的急剧增加,使其类似于具有稳定高死亡率的凹指数曲线。值得注意的是,尽管存在这些差异,但 I 组和 II 组的突变具有相似的性质。它们与(i)“DNA 代谢”(DNA 修复、转录和复制)有关;(ii)与转录因子 Nrf2 相关的氧化应激保护;以及(iii)与增殖相关的调节,(或这些类别可能重叠)。然而,这些不同的突变似乎在生物体水平上产生了相同的结果,即根据 Gompertz 定律加速衰老。这可能是因为所有这些突变都以自己独特的方式,要么减少细胞的寿命,要么加速它们向衰老状态的转变,这支持了 Skulachev 关于衰老存在多种途径(慢性细胞凋亡)的概念。