Frontiers Science Center for Synthetic Biology, Key Laboratory of Systems Bioengineering (MOE), School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China.
Zhejiang Institute of Tianjin University, Ningbo, Zhejiang, P.R. China.
Biotechnol J. 2024 Apr;19(4):e2400026. doi: 10.1002/biot.202400026.
Single-stranded DNA (ssDNA) is the foundation of modern biology, with wide applications in gene editing, sequencing, DNA information storage, and materials science. However, synthesizing ssDNA with high efficiency, high throughput, and low error rate in vitro remains a major challenge. Various methods have been developed for ssDNA synthesis, and some significant results have been achieved. In this review, six main methods were introduced, including solid-phase oligonucleotide synthesis, terminal deoxynucleotidyl transferase-based ssDNA synthesis, reverse transcription, primer exchange reaction, asymmetric polymerase chain reaction, and rolling circle amplification. The advantages and limitations of each method were compared, as well as illustrate their representative achievements and applications. Especially, rolling circle amplification has received significant attention, including ssDNA synthesis, assembly, and application based on recent work. Finally, the future challenges and opportunities of ssDNA synthesis were summarized and discussed. Envisioning the development of new methods and significant progress will be made in the near future with the efforts of scientists around the world.
单链 DNA(ssDNA)是现代生物学的基础,在基因编辑、测序、DNA 信息存储和材料科学等领域有广泛的应用。然而,在体外高效、高通量、低误差率地合成 ssDNA 仍然是一个主要挑战。已经开发了各种方法来合成 ssDNA,并且已经取得了一些重要的成果。在这篇综述中,介绍了六种主要的方法,包括固相寡核苷酸合成、末端脱氧核苷酸转移酶介导的 ssDNA 合成、逆转录、引物交换反应、不对称聚合酶链反应和滚环扩增。比较了每种方法的优缺点,并举例说明了它们的代表性成果和应用。特别是,滚环扩增受到了广泛关注,包括基于最近工作的 ssDNA 合成、组装和应用。最后,总结和讨论了 ssDNA 合成的未来挑战和机遇。预计在不久的将来,随着世界各地科学家的努力,将会开发出新的方法并取得重大进展。