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肽稳定前生物囊泡取决于序列和手性:一种选择与原细胞相关的肽的机制。

Stabilization of Prebiotic Vesicles by Peptides Depends on Sequence and Chirality: A Mechanism for Selection of Protocell-Associated Peptides.

机构信息

Department of Chemistry, University of Washington, Seattle, Washington 98195, United States.

Department of Earth and Space Science, University of Washington, Seattle, Washington 98195, United States.

出版信息

Langmuir. 2024 Apr 30;40(17):8971-8980. doi: 10.1021/acs.langmuir.4c00150. Epub 2024 Apr 17.

DOI:10.1021/acs.langmuir.4c00150
PMID:38629792
Abstract

Cells require oligonucleotides and polypeptides with specific, homochiral sequences to perform essential functions, but it is unclear how such oligomers were selected from random sequences at the origin of life. Cells were probably preceded by simple compartments such as fatty acid vesicles, and oligomers that increased the stability, growth, or division of vesicles could have thereby increased in frequency. We therefore tested whether prebiotic peptides alter the stability or growth of vesicles composed of a prebiotic fatty acid. We find that three of 15 dipeptides tested reduce salt-induced flocculation of vesicles. All three contain leucine, and increasing their length increases the efficacy. Also, leucine-leucine but not alanine-alanine increases the size of vesicles grown by multiple additions of micelles. In a molecular simulation, leucine-leucine docks to the membrane, with the side chains inserted into the hydrophobic core of the bilayer, while alanine-alanine fails to dock. Finally, the heterochiral forms of leucine-leucine, at a high concentration, rapidly shrink the vesicles and make them leakier and less stable to high pH than the homochiral forms do. Thus, prebiotic peptide-membrane interactions influence the flocculation, growth, size, leakiness, and pH stability of prebiotic vesicles, with differential effects due to sequence, length, and chirality. These differences could lead to a population of vesicles enriched for peptides with beneficial sequence and chirality, beginning selection for the functional oligomers that underpin life.

摘要

细胞需要具有特定、手性序列的寡核苷酸和多肽来执行基本功能,但不清楚生命起源时,这些寡聚物是如何从随机序列中被选择出来的。细胞可能是由简单的隔室如脂肪酸囊泡预先存在的,并且能够增加囊泡稳定性、生长或分裂的寡聚物可能因此而增加其频率。因此,我们测试了前生物肽是否会改变由前生物脂肪酸组成的囊泡的稳定性或生长。我们发现,在测试的 15 种二肽中有 3 种可以降低盐诱导的囊泡絮凝。这三种都含有亮氨酸,并且增加其长度会增加功效。此外,亮氨酸-亮氨酸而不是丙氨酸-丙氨酸会增加由胶束多次添加生长的囊泡的大小。在分子模拟中,亮氨酸-亮氨酸与膜对接,侧链插入双层的疏水区,而丙氨酸-丙氨酸则无法对接。最后,亮氨酸-亮氨酸的异手性形式在高浓度下会迅速使囊泡收缩,并使它们对高 pH 值更具渗透性和不稳定性,而手性形式则不会。因此,前生物肽-膜相互作用影响前生物囊泡的絮凝、生长、大小、渗透性和 pH 稳定性,由于序列、长度和手性的差异,会产生不同的影响。这些差异可能导致富含具有有益序列和手性的肽的囊泡群体,从而开始对构成生命的功能性寡聚物进行选择。

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