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太平洋海月水母 Aurelia coerulea 的微生物组。

The microbiome of a Pacific moon jellyfish Aurelia coerulea.

机构信息

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, United States of America.

National Museum of Natural History, Smithsonian Institute, Washington, D.C., United States of America.

出版信息

PLoS One. 2024 Apr 18;19(4):e0298002. doi: 10.1371/journal.pone.0298002. eCollection 2024.

Abstract

The impact of microbiome in animal physiology is well appreciated, but characterization of animal-microbe symbiosis in marine environments remains a growing need. This study characterizes the microbial communities associated with the moon jellyfish Aurelia coerulea, first isolated from the East Pacific Ocean and has since been utilized as an experimental system. We find that the microbiome of this Pacific Aurelia culture is dominated by two taxa, a Mollicutes and Rickettsiales. The microbiome is stable across life stages, although composition varies. Mining the host sequencing data, we assembled the bacterial metagenome-assembled genomes (MAGs). The bacterial MAGs are highly reduced, and predict a high metabolic dependence on the host. Analysis using multiple metrics suggest that both bacteria are likely new species. We therefore propose the names Ca. Mariplasma lunae (Mollicutes) and Ca. Marinirickettsia aquamalans (Rickettsiales). Finally, comparison with studies of Aurelia from other geographical populations suggests the association with Ca. Mariplasma lunae occurs in Aurelia from multiple geographical locations. The low-diversity microbiome of Aurelia provides a relatively simple system to study host-microbe interactions.

摘要

微生物组对动物生理学的影响已得到充分认识,但海洋环境中动物-微生物共生体的特征仍然是一个不断增长的需求。本研究对从东太平洋首次分离并已被用作实验系统的海月水母 Aurelia coerulea 相关微生物群落进行了描述。我们发现,这种太平洋 Aurelia 培养物的微生物组主要由两种分类群组成,即柔膜体纲和立克次体目。微生物组在整个生命阶段都很稳定,尽管组成有所不同。通过对宿主测序数据进行挖掘,我们组装了细菌宏基因组组装基因组 (MAGs)。细菌 MAGs 高度简化,预测对宿主有很高的代谢依赖性。使用多种指标进行分析表明,这两种细菌都可能是新物种。因此,我们提议将它们分别命名为 Ca. Mariplasma lunae(柔膜体纲)和 Ca. Marinirickettsia aquamalans(立克次体目)。最后,与来自其他地理种群的 Aurelia 研究进行比较表明,Ca. Mariplasma lunae 的共生关系存在于来自多个地理位置的 Aurelia 中。Aurelia 的低多样性微生物组为研究宿主-微生物相互作用提供了一个相对简单的系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cadf/11025843/817b684c3b13/pone.0298002.g001.jpg

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