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与镰状细胞贫血中风风险相关的遗传变异:系统评价和荟萃分析。

Genetic Variants Associated with the Risk of Stroke in Sickle Cell Anemia: Systematic Review and Meta-Analysis.

机构信息

Department of Genetics and Genomics, Rajendra Institute of Medical Sciences, Ranchi, Jharkhand, India.

Department of Biochemistry, Rajendra Institute of Medical Sciences, Ranchi, Jharkhand, India.

出版信息

Hemoglobin. 2024 Mar;48(2):101-112. doi: 10.1080/03630269.2024.2340685. Epub 2024 Apr 18.

Abstract

Sickle cell anemia (SCA) is the most common cause of stroke in children. As it is a rare disease, studies investigating the association with complications like stroke in SCD have small sample sizes. Here, we performed a systematic review and meta-analysis of the studies exploring an association of genetic variants with stroke to get a better indication of their association with stroke. PubMed and Google Scholar were searched to identify studies that had performed an association analysis of genetic variants for the risk of stroke in SCA patients. After screening of eligible studies, summary statistics of association analysis with stroke and other general information were extracted. Meta-analysis was performed using the fixed effect method on the tool METAL and forest plots were plotted using the R program. The random effect model was performed as a sensitivity analysis for loci where significant heterogeneity was observed. 407 studies were identified using the search term and after screening 37 studies that cumulatively analyzed 11,373 SCA patients were included. These 37 studies included a total of 2,222 SCA patients with stroke, predominantly included individuals of African ancestry (N = 16). Three of these studies performed whole exome sequencing while 35 performed single nucleotide-based genotyping. Though the studies reported association with 132 loci, meta-analyses could be performed only for 12 loci that had data from two or more studies. After meta-analysis we observed that four loci were significantly associated with risk for stroke: -α3.7 kb ( = 0.00000027), rs489347- ( = 0.00081), rs2238432-9 ( = 0.00085), rs11853426- ( = 0.0034), and rs1800629- ( = 0.0003396). Ethnic representation of regions with a high prevalence of SCD like the Mediterranean basin and India needs to be improved for genetic studies on associated complications like stroke. Larger genome-wide collaborative studies on SCD and associated complications including stroke need to be performed.

摘要

镰状细胞贫血(SCA)是儿童中风的最常见原因。由于这种疾病比较罕见,因此研究中风与 SCD 并发症之间关联的研究样本量都很小。在这里,我们对探索遗传变异与中风之间关联的研究进行了系统回顾和荟萃分析,以更好地了解它们与中风的关联。我们在 PubMed 和 Google Scholar 上搜索了已经对 SCA 患者中风风险的遗传变异进行了关联分析的研究。在筛选合格的研究后,提取了与中风和其他一般信息的关联分析的汇总统计数据。使用 METAL 中的固定效应方法进行荟萃分析,并使用 R 程序绘制森林图。对观察到显著异质性的基因座进行了随机效应模型敏感性分析。使用搜索词确定了 407 项研究,经过筛选,共有 37 项研究对 11373 名 SCA 患者进行了累积分析,这些研究共纳入了 2222 名 SCA 中风患者,主要包括非洲裔个体(N=16)。其中三项研究进行了全外显子测序,35 项研究进行了基于单核苷酸的基因分型。虽然这些研究报告了与 132 个基因座的关联,但只有具有两个或更多研究数据的 12 个基因座可以进行荟萃分析。荟萃分析后,我们观察到四个基因座与中风风险显著相关:-α3.7kb( = 0.00000027)、rs489347-( = 0.00081)、rs2238432-9( = 0.00085)、rs11853426-( = 0.0034)和 rs1800629-( = 0.0003396)。需要改善地中海盆地和印度等 SCD 高发地区的人种代表性,以进行与中风等并发症相关的遗传研究。需要开展更大规模的 SCD 及其相关并发症(包括中风)的全基因组合作研究。

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