• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

放线菌门相对丰度、维生素C摄入量与免疫反应途径相关基因的DNA甲基化之间的关联。

Association between the relative abundance of phyla actinobacteria, vitamin C consumption, and DNA methylation of genes linked to immune response pathways.

作者信息

Noronha Natália Yumi, Noma Isabella Harumi Yonehara, Fernandes Ferreira Rafael, Rodrigues Guilherme da Silva, Martins Luzania Dos Santos, Watanabe Lígia Moriguchi, Pinhel Marcela Augusta de Souza, Mello Schineider Isabelle, Diani Luísa Maria, Carlos Daniela, Nonino Carla Barbosa

机构信息

Department of Gynecology and Obstetrics, University Medical Center Groningen, Groningen, Netherlands.

Faculty of Medicine of Ribeirão Preto, Department of Internal Medicine, University of São Paulo, Ribeirão Preto, Brazil.

出版信息

Front Nutr. 2024 Apr 4;11:1373499. doi: 10.3389/fnut.2024.1373499. eCollection 2024.

DOI:10.3389/fnut.2024.1373499
PMID:38638293
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11024951/
Abstract

INTRODUCTION

There is an emerging body of evidence that vitamin C consumption can modulate microbiota abundance and can also impact DNA methylation in the host, and this could be a link between diet, microbiota, and immune response. The objective of this study was to evaluate common CpG sites associated with both vitamin C and microbiota phyla abundance.

METHODS

Six healthy women participated in this cohort study. They were divided into two groups, according to the amount of vitamin C they ingested. Ingestion was evaluated using the 24-h recall method. The Illumina 450 k BeadChip was used to evaluate DNA methylation. Singular value decomposition analyses were used to evaluate the principal components of this dataset. Associations were evaluated using the differentially methylated position function from the Champ package for R Studio.

RESULTS AND DISCUSSION

The group with higher vitamin C (HVC) ingestion also had a higher relative abundance of Actinobacteria. There was a positive correlation between those variables ( = 0.84,  = 0.01). The HVC group also had higher granulocytes, and regarding DNA methylation, there were 207 CpG sites commonly related to vitamin C ingestion and the relative abundance of Actinobacteria. From these sites, there were 13 sites hypomethylated and 103 hypermethylated. The hypomethylated targets involved the respective processes: immune function, glucose homeostasis, and general cellular metabolism. The hypermethylated sites were also enriched in immune function-related processes, and interestingly, more immune responses against pathogens were detected. These findings contribute to understanding the interaction between nutrients, microbiota, DNA methylation, and the immune response.

摘要

引言

越来越多的证据表明,维生素C的摄入可以调节微生物群的丰度,也会影响宿主的DNA甲基化,这可能是饮食、微生物群和免疫反应之间的一个联系。本研究的目的是评估与维生素C和微生物门类丰度相关的常见CpG位点。

方法

六名健康女性参与了这项队列研究。根据她们摄入的维生素C量,将她们分为两组。采用24小时回顾法评估摄入量。使用Illumina 450 k BeadChip评估DNA甲基化。使用奇异值分解分析来评估该数据集的主成分。使用R Studio的Champ包中的差异甲基化位置函数评估关联性。

结果与讨论

维生素C摄入量较高(HVC)的组中放线菌的相对丰度也较高。这些变量之间存在正相关(r = 0.84,P = 0.01)。HVC组的粒细胞也较多,在DNA甲基化方面,有207个CpG位点与维生素C摄入和放线菌的相对丰度共同相关。在这些位点中,有13个位点低甲基化,103个位点高甲基化。低甲基化靶点涉及各自的过程:免疫功能、葡萄糖稳态和一般细胞代谢。高甲基化位点也富集在免疫功能相关过程中,有趣的是,检测到更多针对病原体的免疫反应。这些发现有助于理解营养素、微生物群、DNA甲基化和免疫反应之间的相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/bf9e70d1bf00/fnut-11-1373499-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/00ecc72341ee/fnut-11-1373499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/a2f12e487ce1/fnut-11-1373499-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/bf9e70d1bf00/fnut-11-1373499-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/00ecc72341ee/fnut-11-1373499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/a2f12e487ce1/fnut-11-1373499-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a200/11024951/bf9e70d1bf00/fnut-11-1373499-g003.jpg

相似文献

1
Association between the relative abundance of phyla actinobacteria, vitamin C consumption, and DNA methylation of genes linked to immune response pathways.放线菌门相对丰度、维生素C摄入量与免疫反应途径相关基因的DNA甲基化之间的关联。
Front Nutr. 2024 Apr 4;11:1373499. doi: 10.3389/fnut.2024.1373499. eCollection 2024.
2
Using Illumina Infinium HumanMethylation 450K BeadChip to explore genome‑wide DNA methylation profiles in a human hepatocellular carcinoma cell line.采用 Illumina Infinium HumanMethylation 450K BeadChip 技术探索人肝癌细胞系的全基因组 DNA 甲基化图谱。
Mol Med Rep. 2018 Nov;18(5):4446-4456. doi: 10.3892/mmr.2018.9441. Epub 2018 Sep 3.
3
Genome-wide DNA methylation patterns in naive CD4+ T cells from patients with primary Sjögren's syndrome.原发性干燥综合征患者初始 CD4+ T 细胞中的全基因组 DNA 甲基化模式。
Arthritis Rheumatol. 2014 Mar;66(3):731-9. doi: 10.1002/art.38264.
4
Differential CpG DNA methylation of peripheral B cells, CD4 T cells, and salivary gland tissues in IgG4-related disease.IgG4 相关疾病中外周 B 细胞、CD4 T 细胞和唾液腺组织的差异 CpG DNA 甲基化。
Arthritis Res Ther. 2023 Jan 7;25(1):4. doi: 10.1186/s13075-022-02978-5.
5
Impact of vitamin C supplementation on placental DNA methylation changes related to maternal smoking: association with gene expression and respiratory outcomes.维生素 C 补充对与母亲吸烟相关的胎盘 DNA 甲基化变化的影响:与基因表达和呼吸结局的关联。
Clin Epigenetics. 2021 Sep 19;13(1):177. doi: 10.1186/s13148-021-01161-y.
6
Genome-wide DNA methylation analysis in dermal fibroblasts from patients with diffuse and limited systemic sclerosis reveals common and subset-specific DNA methylation aberrancies.弥漫性和局限性系统性硬化症患者皮肤成纤维细胞的全基因组DNA甲基化分析揭示了常见和亚型特异性的DNA甲基化异常。
Ann Rheum Dis. 2015 Aug;74(8):1612-20. doi: 10.1136/annrheumdis-2014-205303. Epub 2014 May 8.
7
High-resolution analyses of human sperm dynamic methylome reveal thousands of novel age-related epigenetic alterations.对人类精子动态甲基化组的高分辨率分析揭示了数千种与年龄相关的新型表观遗传改变。
Clin Epigenetics. 2020 Dec 14;12(1):192. doi: 10.1186/s13148-020-00988-1.
8
Enrichment of genomic pathways based on differential DNA methylation profiles associated with knee osteoarthritis pain.基于与膝关节骨关节炎疼痛相关的差异DNA甲基化谱对基因组通路进行富集分析。
Neurobiol Pain. 2022 Nov 3;12:100107. doi: 10.1016/j.ynpai.2022.100107. eCollection 2022 Aug-Dec.
9
Impact of tobacco, alcohol, and marijuana on genome-wide DNA methylation and its relationship with hypertension.烟草、酒精和大麻对全基因组 DNA 甲基化的影响及其与高血压的关系。
Epigenetics. 2023 Dec;18(1):2214392. doi: 10.1080/15592294.2023.2214392.
10
Genome-wide methylation profiling of early colorectal cancer using an Illumina Infinium Methylation EPIC BeadChip.使用Illumina Infinium甲基化EPIC芯片对早期结直肠癌进行全基因组甲基化分析。
World J Gastrointest Oncol. 2022 Apr 15;14(4):935-946. doi: 10.4251/wjgo.v14.i4.935.

引用本文的文献

1
Unraveling the mechanisms of propofol-induced psychological dependence: a multi-omics approach linked to gut microbiota in hippocampal function.揭示丙泊酚诱导心理依赖的机制:一种与海马体功能中肠道微生物群相关的多组学方法。
Front Med (Lausanne). 2025 Apr 3;12:1539467. doi: 10.3389/fmed.2025.1539467. eCollection 2025.
2
Gut Microbiota Dysbiosis, Oxidative Stress, Inflammation, and Epigenetic Alterations in Metabolic Diseases.代谢性疾病中的肠道微生物群失调、氧化应激、炎症和表观遗传改变
Antioxidants (Basel). 2024 Aug 14;13(8):985. doi: 10.3390/antiox13080985.

本文引用的文献

1
Sepsis induces non-classic innate immune memory in granulocytes.败血症在粒细胞中诱导非经典的固有免疫记忆。
Cell Rep. 2023 Sep 26;42(9):113044. doi: 10.1016/j.celrep.2023.113044. Epub 2023 Aug 28.
2
RING-finger E3 ligases regulatory network in PI3K/AKT-mediated glucose metabolism.PI3K/AKT介导的葡萄糖代谢中的环状泛素连接酶E3调控网络。
Cell Death Discov. 2022 Aug 24;8(1):372. doi: 10.1038/s41420-022-01162-7.
3
Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies.
DNA 甲基化的生物信息学分析的样品制备:肥胖及相关特征研究的关联策略。
J Vis Exp. 2022 May 6(183). doi: 10.3791/62598.
4
BMI, waist to height ratio and waist circumference as a screening tool for hypertension in hospital outpatients: a cross-sectional, non-inferiority study.体重指数、腰高比和腰围作为医院门诊高血压筛查工具的横断面非劣效性研究。
BMJ Open. 2021 Nov 25;11(11):e050096. doi: 10.1136/bmjopen-2021-050096.
5
Gut Microbiota as Important Mediator Between Diet and DNA Methylation and Histone Modifications in the Host.肠道微生物群作为饮食与宿主 DNA 甲基化和组蛋白修饰之间的重要介质。
Nutrients. 2020 Feb 25;12(3):597. doi: 10.3390/nu12030597.
6
Role of Dietary Nutrients in the Modulation of Gut Microbiota: A Narrative Review.膳食营养素在调节肠道微生物群中的作用:叙述性综述。
Nutrients. 2020 Jan 31;12(2):381. doi: 10.3390/nu12020381.
7
Reference values for laboratory tests of cholesterol, glycosylated hemoglobin and creatinine of the Brazilian adult population.巴西成年人群胆固醇、糖化血红蛋白和肌酐实验室检测的参考值。
Rev Bras Epidemiol. 2019 Oct 7;22Suppl 02(Suppl 02):e190002.supl.2. doi: 10.1590/1980-549720190002.supl.2. eCollection 2019.
8
A vitamin-C-derived DNA modification catalysed by an algal TET homologue.一种由藻类 TET 同源物催化的维生素 C 衍生的 DNA 修饰。
Nature. 2019 May;569(7757):581-585. doi: 10.1038/s41586-019-1160-0. Epub 2019 May 1.
9
Proposal of a normative table for body fat percentages of Brazilian young adults through bioimpedanciometry.通过生物电阻抗法制定巴西年轻成年人身体脂肪百分比标准表的提议。
J Exerc Rehabil. 2018 Dec 27;14(6):974-979. doi: 10.12965/jer.1836400.200. eCollection 2018 Dec.
10
What is the Healthy Gut Microbiota Composition? A Changing Ecosystem across Age, Environment, Diet, and Diseases.健康的肠道微生物群组成是怎样的?一个随年龄、环境、饮食和疾病变化的生态系统。
Microorganisms. 2019 Jan 10;7(1):14. doi: 10.3390/microorganisms7010014.