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一项关于全球传染病衰退期的研究。

A study of the attenuation stage of a global infectious disease.

作者信息

Sun Tianyi, Jin Baisuo, Wu Yuehua, Bao Junjun

机构信息

Department of Statistics and Finance, University of Science and Technology of China, Hefei, China.

Department of Mathematics and Statistics, York University, Toronto, ON, Canada.

出版信息

Front Public Health. 2024 Apr 5;12:1379481. doi: 10.3389/fpubh.2024.1379481. eCollection 2024.

Abstract

INTRODUCTION

Differences in control measures and response speeds between regions may be responsible for the differences in the number of infections of global infectious diseases. Therefore, this article aims to examine the decay stage of global infectious diseases. We demonstrate our method by considering the first wave of the COVID-19 epidemic in 2020.

METHODS

We introduce the concept of the attenuation rate into the varying coefficient SEIR model to measure the effect of different cities on epidemic control, and make inferences through the integrated adjusted Kalman filter algorithm.

RESULTS

We applied the varying coefficient SEIR model to 136 cities in China where the total number of confirmed cases exceeded 20 after the implementation of control measures and analyzed the relationship between the estimated attenuation rate and local factors. Subsequent analysis and inference results show that the attenuation rate is significantly related to the local annual GDP and the longitude and latitude of a city or a region. We also apply the varying coefficient SEIR model to other regions outside China. We find that the fitting curve of the average daily number of new confirmed cases simulated by the variable coefficient SEIR model is consistent with the real data.

DISCUSSION

The results show that the cities with better economic development are able to control the epidemic more effectively to a certain extent. On the other hand, geographical location also affected the effectiveness of regional epidemic control. In addition, through the results of attenuation rate analysis, we conclude that China and South Korea have achieved good results in controlling the epidemic in 2020.

摘要

引言

地区间防控措施和响应速度的差异可能是全球传染病感染数量差异的原因。因此,本文旨在研究全球传染病的衰减阶段。我们通过考虑2020年新冠疫情的第一波疫情来展示我们的方法。

方法

我们将衰减率的概念引入可变系数SEIR模型,以衡量不同城市对疫情防控的效果,并通过集成调整卡尔曼滤波算法进行推断。

结果

我们将可变系数SEIR模型应用于中国136个实施防控措施后确诊病例总数超过20例的城市,分析了估计的衰减率与当地因素之间的关系。后续分析和推断结果表明,衰减率与当地年度GDP以及城市或地区的经度和纬度显著相关。我们还将可变系数SEIR模型应用于中国以外的其他地区。我们发现可变系数SEIR模型模拟的每日新增确诊病例平均数的拟合曲线与实际数据一致。

讨论

结果表明,经济发展较好的城市在一定程度上能够更有效地控制疫情。另一方面,地理位置也影响了区域疫情防控的效果。此外,通过衰减率分析结果,我们得出中国和韩国在2020年的疫情防控中取得了良好效果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fa4/11026565/5c3e6d12ba4a/fpubh-12-1379481-g0001.jpg

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