Sánchez Andrés, García Valentina, Emiliani-Navarro Yuliana Marcela, Sánchez Jorge, Ramos-Gomez Juan Camilo, González-Rangel Sonia Karina, Munera-Gomez Marlon
Faculty of Health, Medical Research Group (GINUMED), Rafael Nuñez University Corporation, Cartagena, Colombia.
Group of Clinical and Experimental Allergy (GACE), IPS Universitaria, University of Antioquia, Medellín, Colombia.
Rev Alerg Mex. 2024 Feb 1;71(1):57. doi: 10.29262/ram.v71i1.1376.
Identify molecular mimicry between TPO, eosinophil peroxidase (EPX), thyroglobulin and IL24 and microorganism antigens.
Through in silico analysis, we performed local alignments between human and microorganism antigens with PSI-BLAST. Proteins that did not present a 3D structure were modeled by homology through the Swiss Modeller server and epitope prediction was performed through Ellipro. Epitopes were located in the 3D models using PYMOL software.
A total of 38 microorganism antigens (parasites, bacteria) had identities between 30% and 45%, being the highest with Anisakis simplex. The alignment between 2 candidate proteins from A. simplex and EPX presented significant values, with identities of 43 and 44%. In bacteria, Campylobacter jejuni presented the highest identity with thyroglobulin (35%). 220 linear and conformational epitopes of microorganism antigens were predicted. Peroxidasin-like proteins from Toxocara canis and Trichinella pseudospiralis presented 10 epitopes similar to TPO and EPX, as possible molecules triggering cross-reactivity. No virus presented identity with the human proteins studied.
TPO and EPX antigens shared potential cross-reactive epitopes with bacterial and nematode proteins, suggesting that molecular mimicry could be a mechanism that explains the relationship between infections and urticaria/hypothyroidism. In vitro work is needed to demonstrate the results obtained in the in silico analysis.
确定甲状腺过氧化物酶(TPO)、嗜酸性粒细胞过氧化物酶(EPX)、甲状腺球蛋白和白细胞介素24与微生物抗原之间的分子模拟。
通过计算机分析,我们使用PSI-BLAST对人类和微生物抗原进行局部比对。未呈现三维结构的蛋白质通过瑞士模型服务器进行同源建模,并通过Ellipro进行表位预测。使用PYMOL软件在三维模型中定位表位。
共有38种微生物抗原(寄生虫、细菌)的同源性在30%至45%之间,与简单异尖线虫的同源性最高。简单异尖线虫的2种候选蛋白与EPX之间的比对呈现出显著值,同源性分别为43%和44%。在细菌中,空肠弯曲菌与甲状腺球蛋白的同源性最高(35%)。预测了微生物抗原的220个线性和构象表位。犬弓首线虫和伪旋毛虫的过氧化物酶样蛋白呈现出10个与TPO和EPX相似的表位,可能是引发交叉反应的分子。没有病毒与所研究的人类蛋白呈现同源性。
TPO和EPX抗原与细菌和线虫蛋白共享潜在的交叉反应表位,表明分子模拟可能是解释感染与荨麻疹/甲状腺功能减退之间关系的一种机制。需要进行体外研究来证实计算机分析中获得的结果。