Department of Thoracic Surgery, Shandong Provincial Hospital affiliated to Shandong First Medical University, Jinan, China.
Department of Thoracic Oncology, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-Sen University Cancer Center, 651 Dongfeng East Road, Guangzhou, China.
Hum Cell. 2024 Jul;37(4):1141-1155. doi: 10.1007/s13577-024-01068-9. Epub 2024 May 3.
Esophageal squamous cell carcinoma (ESCC) is a common malignant tumor in East Asia. Hypoxia, a hallmark of solid tumors, significantly alters redox homeostasis inside tumor microenvironment. This alteration drives tumor proliferation, invasion, and metastasis, leading to poor prognostic outcomes. However, the role of hypoxia-related genes in ESCC remains poorly understood. We employed RNA sequencing to identify differentially expressed genes in ESCC. Clinical data, transcriptome profiles, and a hypoxia-related gene set were extracted from open-source databases. A prognostic model was constructed using least absolute shrinkage and selection operator (LASSO) regression, which was then validated through Cox regression analysis. Within this prognostic model, we pinpointed and investigated a key hypoxia-related gene affecting prognosis. The gene's expression was validated using real-time PCR and immunohistochemistry in both esophageal carcinoma and normal tissues. Tumor proliferation was examined through in vitro and in vivo assays, including the Cell Counting Kit-8, EdU, colony formation, and subcutaneous tumor models. A robust four-gene prognostic model (VBP1, BGN, CDKN1A, and PPFIA1) was successfully constructed and validated. Among these, VBP1 emerged as a key gene, exhibiting high expression levels that correlated with poor prognosis in ESCC. Functional experiments confirmed that VBP1 significantly accelerated tumor proliferation both in vitro and in vivo. VBP1 is identified as a pivotal gene within the hypoxia-related prognostic signature, and it significantly promotes tumor proliferation in ESCC.
食管鳞状细胞癌(ESCC)是东亚地区常见的恶性肿瘤。缺氧是实体瘤的一个标志特征,它会显著改变肿瘤微环境内部的氧化还原平衡。这种改变驱动肿瘤的增殖、侵袭和转移,导致预后不良。然而,与缺氧相关的基因在 ESCC 中的作用仍知之甚少。我们采用 RNA 测序来鉴定 ESCC 中的差异表达基因。从公开数据库中提取临床数据、转录组图谱和与缺氧相关的基因集。使用最小绝对收缩和选择算子(LASSO)回归构建预后模型,然后通过 Cox 回归分析进行验证。在这个预后模型中,我们确定并研究了一个关键的与缺氧相关的基因,该基因影响预后。使用实时 PCR 和免疫组织化学法在食管癌和正常组织中验证了该基因的表达。通过体外和体内实验,包括细胞计数试剂盒-8、EdU、集落形成和皮下肿瘤模型,研究了肿瘤的增殖。成功构建并验证了一个稳健的四基因预后模型(VBP1、BGN、CDKN1A 和 PPFIA1)。在这些基因中,VBP1 是一个关键基因,其高表达水平与 ESCC 的不良预后相关。功能实验证实,VBP1 显著促进了体外和体内的肿瘤增殖。VBP1 被确定为与缺氧相关的预后特征中的关键基因,它显著促进了 ESCC 中的肿瘤增殖。