Qiu Xirong, Wang Shuyu, Li Chenlu, Wang Yinan
Department of Pharmacology, School of Medicine, Lijiang Culture and Tourism College, Lijiang, Yunnan, China.
PLoS One. 2025 Apr 28;20(4):e0319343. doi: 10.1371/journal.pone.0319343. eCollection 2025.
FUNDC2 is a novel mitochondrial protein and is highly involved in various cancers. However, expression pattern and possible role and mechanism of FUNDC2 in pan-cancer remain to be investigated. TIMER 2.0 was used to investigate the expression patterns and immune infiltration of FUNDC2. GEPIA was applied to study the relationship between level of FUNDC2 and prognosis of the patients with pan-cancer. STRING was employed to analyze the potential interacting proteins of FUNDC2. The phosphorylation sites were predicted by cBioPortal and PhosphoNet. Furthermore, variations of FUNDC2 in cancers were investigated by cBioPortal. Finally, AlphaFold was used to predict the structure of FUNDC2. The data show that there were significant differences in the expression levels of FUNDC2 between cancer tissues and controls. Specifically, the levels of FUNDC2 in 8 cancers were significantly lower than the respective controls. The survival time of the cancer patients with higher levels of FUNDC2 was longer than that of lower FUNDC2 in most different types of cancers. The pattern of FUNDC2 was significantly related to immune infiltration of B cells of cancer patients. STRING analysis revealed that FUNDC2 can interact with FUNDC1, et al. Fifteen phosphorylation sites were predicted by PhosphoNet and cBioPortal, of which the S167 also overlapped with the mutation sites of FUNDC2. These data collectively show that the mitochondrial protein FUNDC2 may serve as a possible prognostic biomarker across various cancers and the mechanism may include immune infiltration.
FUNDC2是一种新型线粒体蛋白,高度参与多种癌症。然而,FUNDC2在泛癌中的表达模式、可能的作用及机制仍有待研究。使用TIMER 2.0来研究FUNDC2的表达模式和免疫浸润情况。应用GEPIA来研究FUNDC2水平与泛癌患者预后之间的关系。使用STRING分析FUNDC2的潜在相互作用蛋白。通过cBioPortal和PhosphoNet预测磷酸化位点。此外,通过cBioPortal研究FUNDC2在癌症中的变异情况。最后,使用AlphaFold预测FUNDC2的结构。数据显示,癌组织和对照之间FUNDC2的表达水平存在显著差异。具体而言,8种癌症中FUNDC2的水平显著低于各自的对照。在大多数不同类型的癌症中,FUNDC2水平较高的癌症患者的生存时间比FUNDC2水平较低的患者更长。FUNDC2的模式与癌症患者B细胞的免疫浸润显著相关。STRING分析显示FUNDC2可与FUNDC1等相互作用。PhosphoNet和cBioPortal预测了15个磷酸化位点,其中S167也与FUNDC2的突变位点重叠。这些数据共同表明,线粒体蛋白FUNDC2可能作为多种癌症的潜在预后生物标志物,其机制可能包括免疫浸润。