• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

通过宏转录组分析探索藏红花的病毒组。

Exploring the viral landscape of saffron through metatranscriptomic analysis.

机构信息

Instituto Botánico. Universidad de Castilla-La Mancha, Campus Universitario s/n, Albacete 02071, Spain.

Instituto Botánico. Universidad de Castilla-La Mancha, Campus Universitario s/n, Albacete 02071, Spain; Escuela Técnica Superior de Ingeniería Agronómica y de Montes y Biotecnología. Departamento de Ciencia y Tecnología Agroforestal y Genética. Universidad de Castilla-La Mancha, Albacete, Spain.

出版信息

Virus Res. 2024 Jul;345:199389. doi: 10.1016/j.virusres.2024.199389. Epub 2024 May 9.

DOI:10.1016/j.virusres.2024.199389
PMID:38714217
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11101869/
Abstract

Saffron (Crocus sativus L.), a historically significant crop valued for its nutraceutical properties, has been poorly explored from a phytosanitary perspective. This study conducted a thorough examination of viruses affecting saffron samples from Spanish cultivars, using high-throughput sequencing alongside a systematic survey of transcriptomic datasets from Crocus sativus at the Sequence Read Archive. Our analysis unveiled a broad diversity and abundance, identifying 17 viruses across the 52 analyzed libraries, some of which were highly prevalent. This includes known saffron-infecting viruses and previously unreported ones. In addition, we discovered 7 novel viruses from the Alphaflexiviridae, Betaflexiviridae, Potyviridae, Solemoviridae, and Geminiviridae families, with some present in libraries from various locations. These findings indicate that the saffron-associated virome is more complex than previously reported, emphasizing the potential of phytosanitary analysis to enhance saffron productivity.

摘要

藏红花（Crocus sativus L.）是一种具有重要历史意义的作物，因其具有营养特性而备受重视，但从植物检疫的角度来看，对其研究还很不完善。本研究采用高通量测序技术，同时对 Sequence Read Archive 中 Crocus sativus 的转录组数据集进行系统调查，对来自西班牙品种的藏红花样本中影响其的病毒进行了全面研究。我们的分析揭示了广泛的多样性和丰度，在分析的 52 个文库中鉴定出 17 种病毒，其中一些具有较高的流行率。其中包括已知感染藏红花的病毒和以前未报道过的病毒。此外，我们还从 Alphaflexiviridae、Betaflexiviridae、Potyviridae、Solemoviridae 和 Geminiviridae 家族发现了 7 种新型病毒，其中一些存在于来自不同地区的文库中。这些发现表明，与藏红花相关的病毒组比以前报道的更为复杂，强调了植物检疫分析提高藏红花产量的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/a5c476e7f33e/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/4592c0576168/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/1ed2aed4a960/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/40c8dba18262/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/f271c6ca8162/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/6859337b9140/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/5f8f3a5359ee/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/e3c66125ee87/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/a5c476e7f33e/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/4592c0576168/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/1ed2aed4a960/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/40c8dba18262/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/f271c6ca8162/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/6859337b9140/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/5f8f3a5359ee/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/e3c66125ee87/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/64cd/11101869/a5c476e7f33e/gr8.jpg

相似文献

1
Exploring the viral landscape of saffron through metatranscriptomic analysis.通过宏转录组分析探索藏红花的病毒组。
Virus Res. 2024 Jul;345:199389. doi: 10.1016/j.virusres.2024.199389. Epub 2024 May 9.
2
Virome analysis of field-collected chilli samples reveals diverse viruses.对田间采集的辣椒样本进行病毒组分析，发现了多种病毒。
Virol J. 2025 Apr 24;22(1):116. doi: 10.1186/s12985-025-02713-x.
3
In-depth study of tomato and weed viromes reveals undiscovered plant virus diversity in an agroecosystem.深入研究番茄和杂草病毒组揭示了农业生态系统中未被发现的植物病毒多样性。
Microbiome. 2023 Mar 28;11(1):60. doi: 10.1186/s40168-023-01500-6.
4
Effects of saffron-grape intercropping on saffron flower number and rhizosphere microbial community.藏红花与葡萄间作对藏红花花数量和根际微生物群落的影响。
BMC Microbiol. 2024 Dec 30;24(1):551. doi: 10.1186/s12866-024-03716-4.
5
Virome: Exploring Public RNA-Seq Data for Viral Discovery and Surveillance.病毒组：利用公开的RNA测序数据进行病毒发现与监测
Viruses. 2025 Apr 26;17(5):624. doi: 10.3390/v17050624.
6
High-Throughput Sequencing of Small RNAs for Diagnostics of Grapevine Viruses and Viroids in Russia.高通量测序在俄罗斯葡萄病毒和类病毒诊断中的应用
Viruses. 2021 Dec 3;13(12):2432. doi: 10.3390/v13122432.
7
High-Throughput Sequencing Reveals Apple Virome Diversity and Novel Viruses in the Czech Republic.高通量测序揭示了捷克共和国苹果病毒组的多样性及新型病毒
Viruses. 2025 Apr 29;17(5):650. doi: 10.3390/v17050650.
8
Genomic diversity of Capillovirus uniheveae (Betaflexiviridae) infecting Hevea brasiliensis Muell. Arg. in Hainan, China.感染中国海南巴西橡胶树的单叶橡胶毛细管病毒（韧皮部柔性病毒科）的基因组多样性
BMC Genomics. 2025 Feb 12;26(1):135. doi: 10.1186/s12864-025-11305-6.
9
The mechanisms of saffron (Crocus sativus') on the inflammatory pathways of diabetes mellitus: A systematic review.藏红花（番红花）对糖尿病炎症途径的作用机制：一项系统评价
Diabetes Metab Syndr. 2022 Jan;16(1):102365. doi: 10.1016/j.dsx.2021.102365. Epub 2021 Dec 14.
10
High Throughput Sequencing-Aided Survey Reveals Widespread Mixed Infections of Whitefly-Transmitted Viruses in Cucurbits in Georgia, USA.高通量测序辅助调查揭示美国乔治亚州葫芦科植物上粉虱传播病毒的广泛混合感染。
Viruses. 2021 May 26;13(6):988. doi: 10.3390/v13060988.

引用本文的文献

1
A Virome Scanning of Saffron ( L.) at the National Scale in Iran Using High-Throughput Sequencing Technologies.利用高通量测序技术对伊朗全国范围内藏红花（Crocus sativus L.）进行病毒组扫描
Viruses. 2025 Aug 4;17(8):1079. doi: 10.3390/v17081079.

本文引用的文献

1
Expanding known viral diversity in plants: virome of 161 species alongside an ancient canal.拓展植物中已知病毒的多样性：沿着一条古老运河的161种植物的病毒组
Environ Microbiome. 2022 Nov 27;17(1):58. doi: 10.1186/s40793-022-00453-x.
2
Insights from the analysis of draft genome sequence of L.来自对L.基因组草图序列分析的见解
Bioinformation. 2022 Jan 31;18(1):1-13. doi: 10.6026/97320630018001. eCollection 2022.
3
Exploring the tymovirales landscape through metatranscriptomics data.通过宏转录组学数据探索 tymovirales 景观。
Arch Virol. 2022 Sep;167(9):1785-1803. doi: 10.1007/s00705-022-05493-9. Epub 2022 Jun 16.
4
Transcriptome Mining Expands Knowledge of RNA Viruses across the Plant Kingdom.转录组挖掘扩展了植物王国中 RNA 病毒的知识。
J Virol. 2022 Dec 21;96(24):e0026022. doi: 10.1128/jvi.00260-22. Epub 2022 May 31.
5
Polerovirus genomic variation.马铃薯Y病毒基因组变异
Virus Evol. 2021 Dec 4;7(2):veab102. doi: 10.1093/ve/veab102. eCollection 2021 Sep.
6
ICTV Virus Taxonomy Profile: 2021.ICTV 病毒分类学简介：2021 年版。
J Gen Virol. 2021 Dec;102(12). doi: 10.1099/jgv.0.001707.
7
A plant-infecting subviral RNA associated with poleroviruses produces a subgenomic RNA which resists exonuclease XRN1 in vitro.一种与马铃薯 Y 病毒属相关的植物感染亚病毒 RNA 能够产生一种亚基因组 RNA，该 RNA 能够在体外抵抗核酸外切酶 XRN1。
Virology. 2022 Jan;566:1-8. doi: 10.1016/j.virol.2021.11.002. Epub 2021 Nov 17.
8
Illuminating the Plant Rhabdovirus Landscape through Metatranscriptomics Data.通过宏转录组学数据揭示植物弹状病毒组景观。
Viruses. 2021 Jul 5;13(7):1304. doi: 10.3390/v13071304.
9
Discovery and Characterization of a Novel Bipartite Botrexvirus From the Phytopathogenic Fungus .从植物病原真菌中发现并鉴定一种新型双链博特病毒。
Front Microbiol. 2021 Jul 1;12:696125. doi: 10.3389/fmicb.2021.696125. eCollection 2021.
10
Impact of two different dehydration methods on saffron quality, concerning the prevalence of Saffron latent virus (SaLV) in Iran.两种不同脱水方法对藏红花质量的影响，考虑到藏红花潜病毒（SaLV）在伊朗的流行情况。
Food Chem. 2021 Feb 1;337:127786. doi: 10.1016/j.foodchem.2020.127786. Epub 2020 Aug 6.