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用于确定包封客体结构的胍基有机磺酸氢键框架的基准测试

Benchmarking Guanidinium Organosulfonate Hydrogen-Bonded Frameworks for Structure Determination of Encapsulated Guests.

作者信息

Yusov Anna, Dillon Alexandra M, Chaudhry Mohammad T, Newman Justin A, Lee Alfred Y, Ward Michael D

机构信息

Department of Chemistry and Molecular Design Institute, New York University, New York City, New York 10003, United States.

Analytical Research and Development, Merck & Co., Inc., 126 East Lincoln Avenue, Rahway, New Jersey 07065, United States.

出版信息

ACS Mater Lett. 2024 Apr 10;6(5):1906-1912. doi: 10.1021/acsmaterialslett.4c00400. eCollection 2024 May 6.

Abstract

Single crystal X-ray diffraction (SCXRD) is arguably the most definitive method for molecular structure determination, but it is often challenged by compounds that are liquids or oils at room temperature or do not form crystals adequate for analysis. Our laboratory previously reported a simple, cost-effective, single-step crystallization method based on guanidinium organosulfonate (GS) hydrogen bonded frameworks for structure determination of a wide range of encapsulated guest molecules, including assignment of the absolute configuration of chiral centers. Herein, we expand on those results and report a head-to-head comparison of the GS method with adamantoid "molecular chaperones", which have been reported to be useful hosts for structure determination. Inclusion compounds limited to only two GS hosts are characterized by low values and Flack parameters, infrequent disorder of the host and guest, and manageable disorder when it does exist. The structures of some target molecules that were not included or resolved using the adamantoid chaperones were successfully included and resolved by the GS hosts, and vice versa. Of the 32 guests attempted by the GS method, 31 inclusion compounds afforded successful guest structure solutions, a 97% success rate. The GS hosts and adamantoid chaperones are complementary with respect to guest inclusion, arguing that both should be employed in the arsenal of methods for structure determination. Furthermore, the low cost of organosulfonate host components promises an accessible route to molecular structure determination for a wide range of users.

摘要

单晶X射线衍射(SCXRD)可以说是确定分子结构最具权威性的方法,但它常常受到室温下为液体或油状、或无法形成适合分析的晶体的化合物的挑战。我们实验室之前报道了一种基于胍基有机磺酸盐(GS)氢键框架的简单、经济高效的单步结晶方法,用于确定多种被包封客体分子的结构,包括手性中心绝对构型的归属。在此,我们扩展这些结果,并报告GS方法与金刚烷类“分子伴侣”的直接比较,金刚烷类“分子伴侣”据报道是用于结构确定的有用主体。限于仅两种GS主体的包合物具有低的 值和Flack参数,主体和客体很少出现无序,且存在无序时易于处理。一些使用金刚烷类分子伴侣未被包合或解析的目标分子的结构,通过GS主体成功地被包合和解析,反之亦然。在GS方法尝试的32个客体中,31个包合物成功获得了客体结构解析结果,成功率为97%。GS主体和金刚烷类分子伴侣在客体包合方面具有互补性,这表明在结构确定方法库中应同时采用这两种方法。此外,有机磺酸盐主体成分的低成本为广大用户提供了一条获取分子结构确定的可行途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0c4/11077584/51e0edf6a7c2/tz4c00400_0001.jpg

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