Child Health Evaluative Sciences, Peter Gilgan Centre for Research and Learning, The Hospital for Sick Children, Toronto, ON, Canada.
Department of Medicine, Division of Respirology, University Health Network, Toronto, ON, Canada.
Contemp Clin Trials. 2024 Jul;142:107560. doi: 10.1016/j.cct.2024.107560. Epub 2024 May 10.
Adaptive trials usually require simulations to determine values for design parameters, demonstrate error rates, and establish the sample size. We designed a Bayesian adaptive trial comparing ventilation strategies for patients with acute hypoxemic respiratory failure using simulations. The complexity of the analysis would usually require computationally expensive Markov Chain Monte Carlo methods but this barrier to simulation was overcome using the Integrated Nested Laplace Approximations (INLA) algorithm to provide fast, approximate Bayesian inference.
We simulated two-arm Bayesian adaptive trials with equal randomization that stratified participants into two disease severity states. The analysis used a proportional odds model, fit using INLA. Trials were stopped based on pre-specified posterior probability thresholds for superiority or futility, separately for each state. We calculated the type I error and power across 64 scenarios that varied the probability thresholds and the initial minimum sample size before commencing adaptive analyses. Two designs that maintained a type I error below 5%, a power above 80%, and a feasible mean sample size were evaluated further to determine the optimal design.
Power generally increased as the initial sample size and the futility threshold increased. The chosen design had an initial recruitment of 500 and a superiority threshold of 0.9925, and futility threshold of 0.95. It maintained high power and was likely to reach a conclusion before exceeding a feasible sample size.
We designed a Bayesian adaptive trial to evaluate novel strategies for ventilation using the INLA algorithm to efficiently evaluate a wide range of designs through simulation.
适应性试验通常需要模拟来确定设计参数的值、演示误差率并确定样本量。我们设计了一项贝叶斯自适应试验,使用模拟比较急性低氧性呼吸衰竭患者的通气策略。分析的复杂性通常需要计算成本高昂的马尔可夫链蒙特卡罗方法,但通过使用集成嵌套拉普拉斯近似(INLA)算法克服了这一模拟障碍,从而提供快速、近似的贝叶斯推断。
我们模拟了具有均等随机化的两臂贝叶斯自适应试验,并将参与者分层为两种疾病严重程度状态。分析使用 INLA 拟合的比例优势模型。根据预先指定的优劣或无效性后验概率阈值,分别针对每种状态停止试验。我们计算了 64 种不同概率阈值和开始适应性分析前的初始最小样本量的情况下的 I 型错误率和功效。评估了两种设计,它们在保持 I 型错误率低于 5%、功效高于 80%和可行的平均样本量的情况下进一步评估,以确定最佳设计。
随着初始样本量和无效性阈值的增加,功效通常会增加。所选择的设计初始招募了 500 名患者,优势阈值为 0.9925,无效性阈值为 0.95。它保持了较高的功效,并且在超过可行的样本量之前可能会得出结论。
我们设计了一项贝叶斯自适应试验,使用 INLA 算法来评估新型通气策略,通过模拟有效地评估广泛的设计。