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南极洲隐藏在从苔藓中分离出的真菌中的真菌病毒宝藏:一种初步的基因组方法。

Antarctica's hidden mycoviral treasures in fungi isolated from mosses: A first genomic approach.

机构信息

Curso de Biotecnologia, Universidade Federal do Pampa, São Gabriel, Brazil.

Núcleo de Estudos da Vegetação Antártica, São Gabriel, Brazil.

出版信息

J Basic Microbiol. 2024 Jul;64(7):e2300671. doi: 10.1002/jobm.202300671. Epub 2024 May 12.

Abstract

This study investigates the presence of mycoviruses in Antarctic fungi and elucidates their evolutionary relationships. To achieve this, we aligned mycoviral gene sequences with genomes of previously sequenced Antarctic endophytic fungi, made available by our research group and accessible via Joint Genome Institute. Our findings reveal that the most prevalent genetic regions in all endophytic fungi are homologous to Partitiviruses, Baculoviridae, and Phycodnaviridae. These regions display evidence of positive selection pressure, suggesting genetic diversity and the accumulation of nonsynonymous mutations. This phenomenon implies a crucial role for these regions in the adaptation and survival of these fungi in the challenging Antarctic ecosystems. The presence of mycoviruses in Antarctic endophytic fungi may indicate shared survival strategies between the virus and its host, shedding light on their evolutionary dynamics. This study underscores the significance of exploring mycoviruses within endophytic fungi and their contributions to genetic diversity. Future research avenues could delve into the functional implications of these conserved mycoviral genetic regions in Antarctic endophytic fungi, providing a comprehensive understanding of this intriguing association and genomic retention of viral region in fungi.

摘要

本研究调查了南极真菌中是否存在真菌病毒,并阐明了它们的进化关系。为此,我们将真菌病毒基因序列与本研究组提供的、可通过联合基因组研究所获得的已测序南极内生真菌基因组进行了比对。我们的研究结果表明,所有内生真菌中最普遍的遗传区域与二分病毒科、杆状病毒科和噬藻体病毒科同源。这些区域显示出正选择压力的证据,表明存在遗传多样性和非同义突变的积累。这种现象表明这些区域在这些真菌适应和生存于具有挑战性的南极生态系统中起着关键作用。南极内生真菌中真菌病毒的存在可能表明病毒与其宿主之间存在共同的生存策略,揭示了它们的进化动态。本研究强调了探索内生真菌中的真菌病毒及其对遗传多样性的贡献的重要性。未来的研究方向可以深入研究这些在南极内生真菌中保守的真菌病毒遗传区域的功能意义,从而全面了解这种有趣的关联和病毒区域在真菌中的基因组保留。

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