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一种铁死亡相关特征可预测肺癌的临床诊断和预后,并与肺癌的免疫微环境相关。

A ferroptosis-related signature predicts the clinical diagnosis and prognosis, and associates with the immune microenvironment of lung cancer.

作者信息

Zhou Hua, Zhou Xiaoting, Zhu Runying, Zhao Zhongquan, Yang Kang, Shen Zhenghai, Sun Hongwen

机构信息

Department of Oncology Radiotherapy, First Affiliated Hospital of Kunming Medical University, Kunming, 650032, Yunnan, China.

Medical School, Kunming University of Science and Technology, Kunming, 650031, Yunnan, China.

出版信息

Discov Oncol. 2024 May 14;15(1):163. doi: 10.1007/s12672-024-01032-x.

Abstract

Targeting ferroptosis-related pathway is a potential strategy for treatment of lung cancer (LC). Consequently, exploration of ferroptosis-related markers is important for treating LC. We collected LC clinical data and mRNA expression profiles from TCGA and GEO database. Ferroptosis-related genes (FRGs) were obtained through FerrDB database. Expression analysis was performed to obtain differentially expressed FRGs. Diagnostic and prognostic models were constructed based on FRGs by LASSO regression, univariate, and multivariate Cox regression analysis, respectively. External verification cohorts GSE72094 and GSE157011 were used for validation. The interrelationship between prognostic risk scores based on FRGs and the tumor immune microenvironment was analyzed. Immunocytochemistry, Western blotting, and RT-qPCR detected the FRGs level. Eighteen FRGs were used for diagnostic models, 8 FRGs were used for prognostic models. The diagnostic model distinguished well between LC and normal samples in training and validation cohorts of TCGA. The prognostic models for TCGA, GSE72094, and GSE157011 cohorts significantly confirmed lower overall survival (OS) in high-risk group, which demonstrated excellent predictive properties of the survival model. Multivariate Cox regression analysis further confirmed risk score was an independent risk factor related with OS. Immunoassays revealed that in high-risk group, a significantly higher proportion of Macrophages_M0, Neutrophils, resting Natural killer cells and activated Mast cells and the level of B7H3, CD112, CD155, B7H5, and ICOSL were increased. In conclusion, diagnostic and prognostic models provided superior diagnostic and predictive power for LC and revealed a potential link between ferroptosis and TIME.

摘要

靶向铁死亡相关通路是治疗肺癌(LC)的一种潜在策略。因此,探索铁死亡相关标志物对治疗LC很重要。我们从TCGA和GEO数据库收集了LC临床数据和mRNA表达谱。通过FerrDB数据库获得铁死亡相关基因(FRGs)。进行表达分析以获得差异表达的FRGs。分别通过LASSO回归、单变量和多变量Cox回归分析,基于FRGs构建诊断和预后模型。使用外部验证队列GSE72094和GSE157011进行验证。分析基于FRGs的预后风险评分与肿瘤免疫微环境之间的相互关系。免疫细胞化学、蛋白质免疫印迹法和逆转录定量聚合酶链反应检测FRGs水平。18个FRGs用于诊断模型,8个FRGs用于预后模型。诊断模型在TCGA的训练和验证队列中能很好地区分LC和正常样本。TCGA、GSE72094和GSE157011队列的预后模型显著证实高风险组的总生存期(OS)较低,这表明生存模型具有出色的预测性能。多变量Cox回归分析进一步证实风险评分是与OS相关的独立危险因素。免疫分析显示,在高风险组中,M0巨噬细胞、中性粒细胞、静息自然杀伤细胞和活化肥大细胞的比例显著更高,且B7H3、CD112、CD155、B7H5和ICOSL的水平升高。总之,诊断和预后模型为LC提供了卓越的诊断和预测能力,并揭示了铁死亡与肿瘤免疫微环境之间的潜在联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57ff/11093956/32d13b0e6858/12672_2024_1032_Fig1_HTML.jpg

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