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开发离心力实时数字 PCR 检测极低 DNA 浓度。

Developing centrifugal force real-time digital PCR for detecting extremely low DNA concentration.

机构信息

RevoSketch Inc., Daejeon, Republic of Korea.

Center for Nano Bio Development, National NanoFab Center (NNFC), Daejeon, Republic of Korea.

出版信息

Sci Rep. 2024 May 21;14(1):11522. doi: 10.1038/s41598-024-62199-5.

Abstract

Digital PCR (dPCR) is a technique for absolute quantification of nucleic acid molecules. To develop a dPCR technique that enables more accurate nucleic acid detection and quantification, we established a novel dPCR apparatus known as centrifugal force real-time dPCR (crdPCR). This system is efficient than other systems with only 2.14% liquid loss by dispensing samples using centrifugal force. Moreover, we applied a technique for analyzing the real-time graph of the each micro-wells and distinguishing true/false positives using artificial intelligence to mitigate the rain, a persistent issue with dPCR. The limits of detection and quantification were 1.38 and 4.19 copies/μL, respectively, showing a two-fold higher sensitivity than that of other comparable devices. With the integration of this new technology, crdPCR will significantly contribute to research on next-generation PCR targeting absolute micro-analysis.

摘要

数字 PCR(dPCR)是一种用于核酸分子绝对定量的技术。为了开发一种能够更准确地检测和定量核酸的 dPCR 技术,我们建立了一种新型的 dPCR 仪器,称为离心力实时 dPCR(crdPCR)。与其他系统相比,该系统通过离心力分配样本,液体损失仅为 2.14%,效率更高。此外,我们应用了一种分析每个微井实时图谱的技术,并使用人工智能区分真/假阳性,以减轻 dPCR 中一直存在的雨状效应问题。检测限和定量限分别为 1.38 拷贝/μL 和 4.19 拷贝/μL,比其他可比设备的灵敏度高两倍。通过集成这项新技术,crdPCR 将为针对绝对微量分析的下一代 PCR 研究做出重大贡献。

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