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利用组成型羟脯氨酸进行苄胺保护来制备冯·希佩尔-林道(VHL)E3泛素连接酶配体。

Preparation of von Hippel-Lindau (VHL) E3 ubiquitin ligase ligands exploiting constitutive hydroxyproline for benzylic amine protection.

作者信息

Soto-Martínez Diana M, Clements Garrett D, Díaz John E, Becher Joy, Reynolds Robert C, Ochsenbauer Christina, Snowden Timothy S

机构信息

Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA

Department of Medicine, Division of Hematology and Oncology, University of Alabama at Birmingham Birmingham AL 35294 USA.

出版信息

RSC Adv. 2024 May 28;14(24):17077-17090. doi: 10.1039/d4ra01974a. eCollection 2024 May 22.

DOI:10.1039/d4ra01974a
PMID:38808246
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11130640/
Abstract

The von Hippel-Lindau (VHL) protein serves as the substrate recognition subunit of the multi-subunit Cullin-2 RING E3 ubiquitin ligase (CRL2), which regulates intracellular concentrations of hypoxia inducible factors (HIFs) through a ubiquitin proteasome system (UPS) cascade. Strategic recruitment of CRL2 by bi- or trifunctional targeted protein degraders (, PROTACs®) offers the prospect of promoting aberrant polyubiquitination and ensuing proteasomal degradation of disease-related proteins. Non-peptidic, l-hydroxyproline-bearing VHL ligands such as VH032 (1) and its chiral benzylic amine analog Me-VH032 (2), are functional components of targeted protein degraders commonly employed for this purpose. Herein, we compare two approaches for the preparation of 1 and 2 primarily highlighting performance differences between Pd(OAc) and Pd-PEPPSI-IPr for the key C-H arylation of 4-methylthiazole. Results from this comparison prompted the development of a unified, five-step route for the preparation of either VH032 (1) or Me-VH032 (2) in multigram quantities, resulting in yields of 56% and 61% for 1 and 2, respectively. Application of -Boc-l-4-hydroxyproline rather than -butoxycarbonyl to shield the benzylic amine during the coupling step enhances step economy. Additionally, we identified previously undisclosed minor byproducts generated during arylation steps along with observations from amine deprotection and amidation reaction steps that may prove helpful not only for the preparation of 1 and 2, but for other VHL recruiting ligands, as well.

摘要

冯·希佩尔-林道(VHL)蛋白作为多亚基Cullin-2 RING E3泛素连接酶(CRL2)的底物识别亚基,通过泛素蛋白酶体系统(UPS)级联反应调节细胞内缺氧诱导因子(HIFs)的浓度。双功能或三功能靶向蛋白降解剂(如PROTACs®)对CRL2的策略性募集为促进异常多聚泛素化以及随后疾病相关蛋白的蛋白酶体降解提供了前景。非肽类、含l-羟基脯氨酸的VHL配体,如VH032(1)及其手性苄胺类似物Me-VH032(2),是常用于此目的的靶向蛋白降解剂的功能成分。在此,我们比较了两种制备1和2的方法,主要突出了Pd(OAc)和Pd-PEPPSI-IPr在4-甲基噻唑关键C-H芳基化反应中的性能差异。该比较结果促使我们开发了一种统一的五步路线,用于多克量制备VH032(1)或Me-VH032(2),1和2的产率分别为56%和61%。在偶联步骤中应用-Boc-l-4-羟基脯氨酸而非-丁氧羰基来保护苄胺可提高步骤经济性。此外,我们鉴定出了芳基化步骤中产生的先前未公开的次要副产物,以及胺脱保护和酰胺化反应步骤中的观察结果,这些不仅可能有助于1和2的制备,也可能有助于其他VHL募集配体的制备。

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本文引用的文献

1
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Eur J Med Chem. 2024 Feb 5;265:116041. doi: 10.1016/j.ejmech.2023.116041. Epub 2023 Dec 14.
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Plausible PEPPSI catalysts for direct C-H functionalization of five-membered heterocyclic bioactive motifs: synthesis, spectral, X-ray crystallographic characterizations and catalytic activity.用于五元杂环生物活性基序直接C-H官能化的合理PEPPSI催化剂:合成、光谱、X射线晶体学表征及催化活性
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Efficient, multi-hundred-gram scale access to E3 ubiquitin ligase ligands for degrader development.
高效、数百克规模获得 E3 泛素连接酶配体用于降解剂开发。
Org Biomol Chem. 2023 Oct 25;21(41):8344-8352. doi: 10.1039/d3ob00983a.
4
Physicochemical Property Determinants of Oral Absorption for PROTAC Protein Degraders.蛋白水解靶向嵌合体(PROTAC)降解剂口服吸收的理化性质决定因素。
J Med Chem. 2023 Jun 22;66(12):8281-8287. doi: 10.1021/acs.jmedchem.3c00740. Epub 2023 Jun 6.
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Current advances of small molecule E3 ligands for proteolysis-targeting chimeras design.小分子 E3 配体在蛋白水解靶向嵌合体设计中的最新进展。
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Discovery of small molecule ligands for the von Hippel-Lindau (VHL) E3 ligase and their use as inhibitors and PROTAC degraders.小分子配体对 von Hippel-Lindau (VHL) E3 连接酶的发现及其作为抑制剂和 PROTAC 降解剂的应用。
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