63种鲇形目海鲇科鱼类的基因组序列草图
The Draft Genome Sequences of 63 Species of Catfish (Ariidae, Siluriformes).
作者信息
Sandoval Melissa M Rincon, Pirro Stacy, Betancur Ricardo
机构信息
Department of Biology, The University of Oklahoma.
Iridian Genomes.
出版信息
Biodivers Genomes. 2024;2024. doi: 10.56179/001c.117717. Epub 2024 May 21.
Abstract
We present genome sequences of 63 species of catfish from the Ariidae family. Illumina sequencing was performed on tissue from wild-collected museum specimens. The reads were assembled using a de novo method followed by a finishing step. The raw and assembled data are publicly available via Genbank.
摘要
我们展示了63种海鲶科鲶鱼的基因组序列。对从野生采集的博物馆标本中获取的组织进行了Illumina测序。使用从头组装方法对读数进行组装，随后进行完善步骤。原始数据和组装后的数据可通过Genbank公开获取。
相似文献
1
The Draft Genome Sequences of 63 Species of Catfish (Ariidae, Siluriformes).63种鲇形目海鲇科鱼类的基因组序列草图
Biodivers Genomes. 2024;2024. doi: 10.56179/001c.117717. Epub 2024 May 21.
2
The Complete Genome Sequences of 29 Species of Ducks (Anatidae, Anseriformes).29种鸭（鸭科，雁形目）的全基因组序列
Biodivers Genomes. 2024 Aug;2024. doi: 10.56179/001c.122134.
3
The Complete Genome Sequences of 7 Species of Nudibranchs (Nudibranchia, Gastropoda).7种裸鳃亚目动物（裸鳃目，腹足纲）的全基因组序列
Biodivers Genomes. 2024;2024. doi: 10.56179/001c.118546. Epub 2024 May 28.
4
The Complete Genome Sequences of seven species of sea slugs (Nudibranchia, Gastropoda, Mollusca).七种海蛞蝓（裸鳃亚目、腹足纲、软体动物门）的全基因组序列
Biodivers Genomes. 2024;2024. doi: 10.56179/001c.92315. Epub 2024 Jan 17.
5
The Complete Genome Sequences of 11 Species of Kingbirds (Tyrannus, Tyrannidae, Passeriformes).11种必胜鸟（霸鹟科、雀形目、霸鹟属）的全基因组序列
Biodivers Genomes. 2025;2025. doi: 10.56179/001c.129593. Epub 2025 Feb 13.
6
The Complete Genome Sequences of 19 Species of Snipes (Scolopacidae, Charadriiformes, Aves).19种鹬（鹬科，鸻形目，鸟类）的全基因组序列
Biodivers Genomes. 2023;2023. doi: 10.56179/001c.74632. Epub 2023 Apr 21.
7
The Complete Genome Sequences of 12 Species of (Cyprinidae, Cypriniformes, Actinopteri).鲤形目鲤科（辐鳍鱼纲）12个物种的全基因组序列
Biodivers Genomes. 2024 Apr;2024. doi: 10.56179/001c.116676. Epub 2024 Apr 19.
8
The Complete Genome Sequences of 5 Species of Sardinella (Clupeidae, Clupeiformes).5种小沙丁鱼（鲱科，鲱形目）的全基因组序列
Biodivers Genomes. 2023;2023. doi: 10.56179/001c.91277. Epub 2023 Nov 20.
9
The Complete Genome Sequences of 22 Species of Owls (Strigiformes, Aves).22种猫头鹰（鸮形目，鸟类）的全基因组序列
Biodivers Genomes. 2025;2025. doi: 10.56179/001c.128167. Epub 2025 Jan 10.
10
The Complete Genome Sequences of 30 Species of Falcons (Falconiformes, Aves).30种隼形目鸟类（隼科，鸟纲）的全基因组序列
Biodivers Genomes. 2024;2024. doi: 10.56179/001c.127653. Epub 2024 Dec 19.
本文引用的文献
1
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
2
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
Zotero 插件