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利用开放科学实践,通过交互式教程教授生态学和进化生物学。

Harnessing open science practices to teach ecology and evolutionary biology using interactive tutorials.

作者信息

Griffith Jory E, Houghton Elizabeth, Slein Margaret A, Fraser Franco Maxime, Chávez Jhoan, Forsythe Amy B, Glynn Victoria M, Katkov Egor, Palmier Kirsten M, Sang Zihaohan, Trejo-Pérez Rolando, Wiley Bryn, Sunday Jennifer M, Bernhardt Joey R

机构信息

Department of Biology McGill University Montreal Quebec Canada.

Department of Biology University of British Columbia (Okanagan) Kelowna British Columbia Canada.

出版信息

Ecol Evol. 2024 May 30;14(6):e11179. doi: 10.1002/ece3.11179. eCollection 2024 Jun.

Abstract

Open science skills are increasingly important for a career in ecology and evolutionary biology (EEB) as efforts to make data and analyses publicly available continue to become more commonplace. While learning core concepts in EEB, students are also expected to gain skills in conducting open science to prepare for future careers. Core open science skills like programming, data sharing, and practices that promote reproducibility can be taught to undergraduate students alongside core concepts in EEB. Yet, these skills are not always taught in biology undergraduate programs, and a major challenge in developing open science skills and learning EEB concepts simultaneously is the high cognitive load associated with learning multiple disparate concepts at the same time. One solution is to provide students with easily digestible, scaffolded, pre-formatted code in the form of vignettes and interactive tutorials. Here, we present six open source teaching tutorials for undergraduate students in EEB. These tutorials teach fundamental ecological concepts, data literacy, programming (using software), and analysis skills using publicly available datasets while introducing students to open science concepts and tools. Spanning a variety of EEB topics and skill levels, these tutorials serve as examples and resources for educators to integrate open science tools, programming, and data literacy into teaching EEB at the undergraduate level.

摘要

随着使数据和分析公开可用的努力变得越来越普遍,开放科学技能对于生态学和进化生物学(EEB)领域的职业发展愈发重要。在学习EEB核心概念的同时,学生还应掌握开展开放科学的技能,为未来的职业做好准备。诸如编程、数据共享以及促进可重复性的实践等核心开放科学技能,可以与EEB的核心概念一起教授给本科生。然而,这些技能在生物学本科课程中并不总是会被传授,同时培养开放科学技能和学习EEB概念的一个主要挑战是,同时学习多个不同概念会带来较高的认知负担。一种解决方案是通过示例和交互式教程的形式,为学生提供易于理解、有支架支撑且预先格式化的代码。在此,我们为EEB专业的本科生提供六个开源教学教程。这些教程利用公开可用的数据集教授基本的生态概念、数据素养、编程(使用软件)和分析技能,同时向学生介绍开放科学概念和工具。这些教程涵盖了各种EEB主题和技能水平,可作为教育工作者将开放科学工具、编程和数据素养融入本科阶段EEB教学的示例和资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b30/11139548/90d66d55c734/ECE3-14-e11179-g002.jpg

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