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黏合蛋白复合体:结构与 DNA 相互作用原理。

Cohesin Complex: Structure and Principles of Interaction with DNA.

机构信息

Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia.

Technion - Israel Institute of Technology, Haifa, 3525433, Israel.

出版信息

Biochemistry (Mosc). 2024 Apr;89(4):585-600. doi: 10.1134/S0006297924040011.

Abstract

Accurate duplication and separation of long linear genomic DNA molecules is associated with a number of purely mechanical problems. SMC complexes are key components of the cellular machinery that ensures decatenation of sister chromosomes and compaction of genomic DNA during division. Cohesin, one of the essential eukaryotic SMC complexes, has a typical ring structure with intersubunit pore through which DNA molecules can be threaded. Capacity of cohesin for such topological entrapment of DNA is crucial for the phenomenon of post-replicative association of sister chromatids better known as cohesion. Recently, it became apparent that cohesin and other SMC complexes are, in fact, motor proteins with a very peculiar movement pattern leading to formation of DNA loops. This specific process has been called loop extrusion. Extrusion underlies multiple functions of cohesin beyond cohesion, but molecular mechanism of the process remains a mystery. In this review, we summarized the data on molecular architecture of cohesin, effect of ATP hydrolysis cycle on this architecture, and known modes of cohesin-DNA interactions. Many of the seemingly disparate facts presented here will probably be incorporated in a unified mechanistic model of loop extrusion in the not-so-distant future.

摘要

准确复制和分离长线性基因组 DNA 分子与许多纯粹的机械问题有关。SMC 复合物是细胞机器的关键组成部分,可确保姐妹染色体在分裂过程中解链和基因组 DNA 压缩。黏合蛋白是必需的真核 SMC 复合物之一,具有典型的环结构,亚基之间有一个孔,DNA 分子可以穿过这个孔。黏合蛋白对 DNA 拓扑束缚的这种能力对于复制后姐妹染色单体的关联现象(即黏合)至关重要。最近,黏合蛋白和其他 SMC 复合物实际上是具有非常特殊运动模式的马达蛋白,导致 DNA 环的形成,这一点变得明显。这一特定过程被称为环挤出。挤出是黏合蛋白除了黏合之外的多种功能的基础,但该过程的分子机制仍然是一个谜。在这篇综述中,我们总结了黏合蛋白的分子结构、ATP 水解循环对该结构的影响以及已知的黏合蛋白-DNA 相互作用模式等方面的数据。这里呈现的许多看似不同的事实可能会在不久的将来被纳入一个统一的环挤出机制模型中。

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