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(科贝尔特,1879年)的完整线粒体基因组。

The complete mitochondrial genome of (Kobelt, 1879).

作者信息

Matos Ana, Gomes-Dos-Santos André, Teixeira Amílcar, Varandas Simone, Sousa Ronaldo, Karaouzas Ioannis, Zogaris Stamatis, Froufe Elsa, Lopes-Lima Manuel

机构信息

CIIMAR/CIMAR-Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Matosinhos, Portugal.

Centro de Investigação de Montanha (CIMO), Instituto Politécnico de Bragança, Bragança, Portugal.

出版信息

Mitochondrial DNA B Resour. 2024 Jun 3;9(6):696-700. doi: 10.1080/23802359.2024.2353271. eCollection 2024.

DOI:10.1080/23802359.2024.2353271
PMID:38835640
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11149565/
Abstract

Freshwater mussels (Bivalvia, Unionida) play essential roles in the well-functioning of ecosystems, even providing essential services to humans. However, these bivalves face numerous threats (e.g. habitat loss and fragmentation, pollution, introduction of invasive species, and climate change) which have already led to the extinction of many populations. This underscores the need to fully characterize the biology of these species, particularly those, such as , that are still poorly studied. This study presents the first mitogenome of (Kobelt, 1879), an endemic species of Greece with a distribution limited to only two river basins. The mitochondrial genome of a specimen, collected at Pamisos River (Peloponnese, Greece), was sequenced by Illumina high-throughput sequencing. This mitogenome (16,101 bp) is characterized by 13 protein-coding genes, 22 transfer RNA and 2 ribosomal RNA genes. The size of this mitogenome is within the range of another mitogenome already published for the species . In the phylogenetic inference, was recovered as monophyletic with mitogenome in the Lamprotulini tribe, as expected. This genomic resource will assist in genetically characterizing the species, potentially benefiting future evolutionary studies and conservation efforts.

摘要

淡水贻贝(双壳纲,蚌目)在生态系统的良好运转中发挥着重要作用,甚至为人类提供重要服务。然而,这些双壳类动物面临着众多威胁(如栖息地丧失和破碎化、污染、入侵物种的引入以及气候变化),这些威胁已经导致许多种群灭绝。这凸显了全面描述这些物种生物学特性的必要性,特别是那些研究仍很匮乏的物种,比如[具体物种名称未给出]。本研究展示了[具体物种名称未给出](科贝尔特,1879年)的首个线粒体基因组,该物种是希腊的特有物种,分布仅限于两个流域。对在希腊伯罗奔尼撒半岛帕米索斯河采集的一个[具体物种名称未给出]样本的线粒体基因组进行了Illumina高通量测序。这个线粒体基因组(16,101 bp)由13个蛋白质编码基因、22个转运RNA基因和2个核糖体RNA基因组成。该线粒体基因组的大小在已发表的该物种另一个线粒体基因组的范围内。在系统发育推断中,正如预期的那样,[具体物种名称未给出]与Lamprotulini部落中的[具体物种名称未给出]线粒体基因组一起被归为单系类群。这种基因组资源将有助于对该物种进行基因特征描述,可能有益于未来的进化研究和保护工作。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/742a10fa3eaf/TMDN_A_2353271_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/bef14dcaf008/TMDN_A_2353271_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/24e6ab79cddf/TMDN_A_2353271_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/742a10fa3eaf/TMDN_A_2353271_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/bef14dcaf008/TMDN_A_2353271_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/24e6ab79cddf/TMDN_A_2353271_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fd/11149565/742a10fa3eaf/TMDN_A_2353271_F0003_C.jpg

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本文引用的文献

1
A global synthesis of ecosystem services provided and disrupted by freshwater bivalve molluscs.全球范围内淡水双壳贝类提供和破坏的生态系统服务综合评估。
Biol Rev Camb Philos Soc. 2022 Oct;97(5):1967-1998. doi: 10.1111/brv.12878. Epub 2022 Jun 30.
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Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes.提高后生动物线粒体基因组中编码蛋白基因边界的注释。
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Mesozoic mitogenome rearrangements and freshwater mussel (Bivalvia: Unionoidea) macroevolution.
中生代线粒体基因组重排与淡水贝类(双壳纲:贻贝目)的宏观进化。
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Accurate annotation of protein-coding genes in mitochondrial genomes.线粒体基因组中蛋白质编码基因的准确注释。
Mol Phylogenet Evol. 2017 Jan;106:209-216. doi: 10.1016/j.ympev.2016.09.024. Epub 2016 Sep 28.
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The male and female complete mitochondrial genome sequences of the Endangered freshwater mussel Potomida littoralis (Cuvier, 1798) (Bivalvia: Unionidae).濒危淡水贻贝Potomida littoralis(居维叶,1798年)(双壳纲:珠蚌科)的雄性和雌性线粒体基因组完整序列。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3571-2. doi: 10.3109/19401736.2015.1074223. Epub 2015 Aug 14.
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Phylogeny, phylogeography, and evolution in the Mediterranean region: News from a freshwater mussel (Potomida, Unionida).地中海地区的系统发育、系统地理学与进化:来自一种淡水贻贝(Potomida,蚌目)的新消息。
Mol Phylogenet Evol. 2016 Jul;100:322-332. doi: 10.1016/j.ympev.2016.04.030. Epub 2016 Apr 24.
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