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系统生物学方法在阐明外显率降低因素中的新作用:以X连锁肌张力障碍的转录变化为例

Emerging role of a systems biology approach to elucidate factors of reduced penetrance: transcriptional changes in -linked dystonia as an example.

作者信息

Diaw Sokhna Haissatou, Ott Fabian, Münchau Alexander, Lohmann Katja, Busch Hauke

机构信息

Institute of Neurogenetics, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany.

Institute of Experimental Dermatology and Institute of Cardiogenetics, University of Lübeck, 23562 Lübeck, Germany.

出版信息

Med Genet. 2022 Aug 12;34(2):131-141. doi: 10.1515/medgen-2022-2126. eCollection 2022 Jun.

DOI:10.1515/medgen-2022-2126
PMID:38835919
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11006298/
Abstract

Pathogenic variants in can cause dystonia with a penetrance of about 50 %. The underlying mechanisms are unknown and can be considered as means of endogenous disease protection. Since encodes a transcription factor, drivers of this variability putatively act at the transcriptome level. Several transcriptome studies tried to elucidate THAP1 function in diverse cellular and mouse models, including mutation carrier-derived cells and iPSC-derived neurons, unveiling various differentially expressed genes and affected pathways. These include nervous system development, dopamine signalling, myelination, or cell-cell adhesion. A network diffusion analysis revealed mRNA splicing, mitochondria, DNA repair, and metabolism as significant pathways that may represent potential targets for therapeutic interventions.

摘要

[基因名称]中的致病变异可导致肌张力障碍,其外显率约为50%。潜在机制尚不清楚,可被视为内源性疾病保护的方式。由于[基因名称]编码一种转录因子,这种变异性的驱动因素可能在转录组水平上起作用。多项转录组研究试图在不同的细胞和小鼠模型中阐明THAP1的功能,包括突变携带者来源的细胞和诱导多能干细胞衍生的神经元,揭示了各种差异表达的基因和受影响的通路。这些包括神经系统发育、多巴胺信号传导、髓鞘形成或细胞间粘附。网络扩散分析表明,mRNA剪接、线粒体、DNA修复和代谢是重要通路,可能代表治疗干预的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/0a35c8a03e26/j_medgen-2022-2126_fig_003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/1523a1a1e424/j_medgen-2022-2126_fig_001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/f59564253cfb/j_medgen-2022-2126_fig_002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/0a35c8a03e26/j_medgen-2022-2126_fig_003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/1523a1a1e424/j_medgen-2022-2126_fig_001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/f59564253cfb/j_medgen-2022-2126_fig_002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/11006298/0a35c8a03e26/j_medgen-2022-2126_fig_003.jpg

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本文引用的文献

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Mov Disord. 2022 Jan;37(1):227-228. doi: 10.1002/mds.28813. Epub 2021 Oct 7.
2
The dystonia gene THAP1 controls DNA double-strand break repair choice.该抽搐基因 THAP1 控制 DNA 双链断裂修复选择。
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YY1-Related Dystonia: Clinical Aspects and Long-Term Response to Deep Brain Stimulation.
与YY1相关的肌张力障碍:临床特征及对脑深部电刺激的长期反应
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Linking Penetrance and Transcription in DYT-THAP1: Insights From a Human iPSC-Derived Cortical Model.链接 DYT-THAP1 中的外显率和转录:来自人类 iPSC 衍生皮质模型的见解。
Mov Disord. 2021 Jun;36(6):1381-1391. doi: 10.1002/mds.28506. Epub 2021 Feb 6.
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Genotype-Phenotype Relations for Isolated Dystonia Genes: MDSGene Systematic Review.孤立性肌张力障碍基因的基因型-表型关系:MDSGene 系统评价。
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Investigating the role of striatal dopamine receptor 2 in motor coordination and balance: Insights into the pathogenesis of DYT1 dystonia.研究纹状体多巴胺受体 2 在运动协调和平衡中的作用:对 DYT1 型肌张力障碍发病机制的深入了解。
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Ann Neurol. 2021 Mar;89(3):485-497. doi: 10.1002/ana.25973. Epub 2020 Dec 15.
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