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分析和计算机方法研究二嗪磷与血红蛋白的相互作用。

Analytic and In Silico Methods to Understand the Interactions between Dinotefuran and Haemoglobin.

机构信息

Department of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, New Delhi, India.

Department of Chemistry, SRM Institute of Science & Technology, Delhi-NCR Campus, Modinagar, Ghaziabad, India.

出版信息

Chem Biodivers. 2024 Aug;21(8):e202400495. doi: 10.1002/cbdv.202400495. Epub 2024 Jul 23.

Abstract

This work lies in the growing concern over the potential impacts of pesticides on human health and the environment. Pesticides are extensively used to protect crops and control pests, but their interaction with essential biomolecules like haemoglobin (Hb) remains poorly understood. Spectrofluorometric, electrochemical, and in silico investigations have been chosen as potential methods to delve into this issue, as they offer valuable insights into the molecular-level interactions between pesticides and haemoglobin. The research aims to address the gaps in knowledge and contribute to developing safer and more sustainable pesticide practices. The interaction was studied by spectroscopic techniques (UV-Visible & Fluorescence), in silico studies (molecular docking & molecular dynamics simulations) and electrochemical techniques (cyclic voltammetry and tafel). The studies showed effective binding of dinotefuran with the Hb which will cause toxicity to human. The formation of a stable molecular complex between ofloxacin and Haemoglobin was shown via molecular docking and the binding energy was found to be -5.37 kcal/mol. Further, molecular dynamics simulations provide an insight for the stability of the complex (Hb-dinotefuran) for a span of 250 ns with a binding free energy of -53.627 kJ/mol. Further, cyclic voltammetry and tafel studies show the interaction of dinotefuran with Hb effectively.

摘要

这项工作源于人们对农药对人类健康和环境潜在影响的日益关注。农药被广泛用于保护作物和控制害虫,但它们与血红蛋白(Hb)等重要生物分子的相互作用仍知之甚少。荧光光谱法、电化学和计算研究已被选为潜在的方法来深入研究这个问题,因为它们为了解农药和血红蛋白之间的分子水平相互作用提供了有价值的见解。该研究旨在填补知识空白,并为开发更安全、更可持续的农药实践做出贡献。通过光谱技术(紫外可见和荧光)、计算研究(分子对接和分子动力学模拟)和电化学技术(循环伏安法和塔菲尔法)研究了相互作用。研究表明,二嗪磷与血红蛋白的有效结合会对人类造成毒性。通过分子对接显示了氧氟沙星与血红蛋白之间形成稳定的分子配合物,结合能为-5.37 kcal/mol。此外,分子动力学模拟为配合物(Hb-二嗪磷)的稳定性提供了 250ns 跨度内的见解,结合自由能为-53.627 kJ/mol。此外,循环伏安法和塔菲尔研究表明二嗪磷与 Hb 有效相互作用。

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