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三种新型溴代取代的3-甲基-1-(苯基磺酰基)-1-吲哚衍生物的晶体结构和 Hirshfeld 表面分析

The crystal structures and Hirshfeld surface analysis of three new bromo-substituted 3-methyl-1-(phenyl-sulfon-yl)-1-indole derivatives.

作者信息

Madhan S, NizamMohideen M, Harikrishnan K, MohanaKrishnan Arasambattu K

机构信息

Department of Physics, The New College, Chennai 600 014, University of Madras, Tamil Nadu, India.

Department of organic Chemistry, University of Madras, Guindy Campus, Chennai-600 025, Tamilnadu, India.

出版信息

Acta Crystallogr E Crystallogr Commun. 2024 May 31;80(Pt 6):682-690. doi: 10.1107/S2056989024004985. eCollection 2024 May 1.

DOI:10.1107/S2056989024004985
PMID:38845706
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11151307/
Abstract

Three new 1-indole derivatives, namely, 2-(bromo-meth-yl)-3-methyl-1-(phenyl-sulfon-yl)-1-indole, CHBrNOS, (), 2-[()-2-(2-bromo-5-meth-oxy-phen-yl)ethen-yl]-3-methyl-1-(phenyl-sulfon-yl)-1-indole, CHBrNOS, (), and 2-[()-2-(2-bromo-phen-yl)ethen-yl]-3-methyl-1-(phenyl-sulfon-yl)-1-indole, CHBrNOS, (), exhibit nearly orthogonal orientations of their indole ring systems and sulfonyl-bound phenyl rings. Such conformations are favourable for inter-molecular bonding involving sets of slipped π-π inter-actions between the indole systems and mutual C-H⋯π hydrogen bonds, with the generation of two-dimensional monoperiodic patterns. The latter are found in all three structures, in the form of supra-molecular columns with every pair of successive mol-ecules related by inversion. The crystal packing of the compounds is additionally stabilized by weaker slipped π-π inter-actions between the outer phenyl rings (in and ) and by weak C-H⋯O, C-H⋯Br and C-H⋯π hydrogen bonds. The structural significance of the different kinds of inter-actions agree with the results of a Hirshfeld surface analysis and the calculated inter-action energies. In particular, the largest inter-action energies (up to -60.8 kJ mol) are associated with pairing of anti-parallel indole systems, while the energetics of weak hydrogen bonds and phenyl π-π inter-actions are comparable and account for 13-34 kJ mol.

摘要

三种新的1-吲哚衍生物,即2-(溴甲基)-3-甲基-1-(苯磺酰基)-1-吲哚(CHBrNOS,())、2-[()-2-(2-溴-5-甲氧基苯基)乙烯基]-3-甲基-1-(苯磺酰基)-1-吲哚(CHBrNOS,())和2-[()-2-(2-溴苯基)乙烯基]-3-甲基-1-(苯磺酰基)-1-吲哚(CHBrNOS,()),其吲哚环系统和磺酰基连接的苯环呈现出近乎正交的取向。这种构象有利于分子间键合,包括吲哚系统之间的一组滑移π-π相互作用以及相互的C-H⋯π氢键,从而产生二维单周期模式。在所有三种结构中都发现了后者,其形式为超分子柱,每对连续的分子通过倒反相关。这些化合物的晶体堆积还通过外部苯环之间较弱的滑移π-π相互作用(在()和()中)以及弱C-H⋯O、C-H⋯Br和C-H⋯π氢键得到进一步稳定。不同种类相互作用的结构意义与Hirshfeld表面分析结果和计算得到的相互作用能一致。特别是,最大的相互作用能(高达-60.8 kJ mol)与反平行吲哚系统的配对相关,而弱氢键和苯基π-π相互作用的能量相当,占13 - 34 kJ mol。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/70016c23e51e/e-80-00682-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/a9e157d2c69d/e-80-00682-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/a02a7a90ebd9/e-80-00682-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/c24ced126c6f/e-80-00682-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/8b632eb98456/e-80-00682-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/0347d6e05eae/e-80-00682-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/594e0bb91f11/e-80-00682-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/6b2f58c5e9e4/e-80-00682-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/6742b17338d1/e-80-00682-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/f252748103d5/e-80-00682-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/70016c23e51e/e-80-00682-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/a9e157d2c69d/e-80-00682-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/a02a7a90ebd9/e-80-00682-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/c24ced126c6f/e-80-00682-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/8b632eb98456/e-80-00682-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/0347d6e05eae/e-80-00682-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/594e0bb91f11/e-80-00682-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/6b2f58c5e9e4/e-80-00682-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/6742b17338d1/e-80-00682-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/f252748103d5/e-80-00682-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/093c/11151307/70016c23e51e/e-80-00682-fig10.jpg

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