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4-[(1)-({[(苄基硫烷基)甲硫基]氨基}-亚氨基)-甲基]苯-1,3-二醇氯仿半溶剂化物:晶体结构、 Hirshfeld表面分析及计算研究

4-[(1)-({[(Benzyl-sulfan-yl)methane-thio-yl]amino}-imino)-meth-yl]benzene-1,3-diol chloro-form hemisolvate: crystal structure, Hirshfeld surface analysis and computational study.

作者信息

Khairuanuar Nadia Liyana, Crouse Karen A, Kwong Huey Chong, Tan Sang Loon, Tiekink Edward R T

机构信息

Department of Chemistry, Faculty of Science, Universiti Putra Malaysia, UPM, Serdang 43400, Malaysia.

Research Centre for Crystalline Materials, School of Science and Technology, Sunway University, 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia.

出版信息

Acta Crystallogr E Crystallogr Commun. 2020 Jun 2;76(Pt 7):990-997. doi: 10.1107/S2056989020007070. eCollection 2020 Jul 1.

Abstract

The title hydrazine carbodi-thio-ate chloro-form hemisolvate, 2CHNOS·CHCl, comprises two independent hydrazine carbodi-thio-ate mol-ecules, and , and a chloro-form mol-ecule; the latter is statistically disordered about its mol-ecular threefold axis. The common features of the organic mol-ecules include an almost planar, central CNS chromophore [r.m.s. deviation = 0.0203 Å () and 0.0080 Å ()], an configuration about the imine bond and an intra-molecular hydroxyl-O-H⋯N(imine) hydrogen bond. The major conformational difference between the mol-ecules is seen in the relative dispositions of the phenyl rings as indicated by the values of the dihedral angles between the central plane and phenyl ring of 71.21 (6)° () and 54.73 (7)° (). Finally, a difference is seen in the disposition of the outer hydroxyl-H atoms, having opposite relative orientations. In the calculated gas-phase structure, the entire mol-ecule is planar with the exception of the perpendicular phenyl ring. In the mol-ecular packing, the and mol-ecules assemble into a two-mol-ecule aggregate N-H⋯S hydrogen bonds and eight-membered {⋯HNCS} synthons. The dimeric assemblies are connected into supra-molecular chains hydroxyl-O-H⋯O(hydrox-yl) hydrogen bonds and these are linked into a double-chain through hy-droxy-O-H⋯π(phen-yl) inter-actions. The double-chains are connected into a three-dimensional architecture through phenyl-C-H⋯O(hydrox-yl) and phenyl-C-H⋯π(phen-yl) inter-actions. The overall assembly defines columns along the -axis direction in which reside the chloro-form mol-ecules, which are stabilized by chloro-form-methine-C-H⋯S(thione) and phenyl-C-H⋯Cl contacts. The analysis of the calculated Hirshfeld surfaces, non-covalent inter-action plots and inter-action energies confirm the importance of the above-mentioned inter-actions, but also of cooperative, non-standard inter-actions such as π(benzene)⋯π(hydrogen-bond-mediated-ring) contacts.

摘要

标题为二硫代碳酰肼氯仿半溶剂合物,2CHNOS·CHCl,包含两个独立的二硫代碳酰肼分子, 和 ,以及一个氯仿分子;后者围绕其分子三重轴存在统计无序。有机分子的共同特征包括一个几乎平面的、中心的CNS发色团[均方根偏差 = 0.0203 Å()和0.0080 Å()],亚胺键周围的 构型以及分子内羟基 - O - H⋯N(亚胺)氢键。分子之间主要的构象差异体现在苯环的相对排布上,由中心平面与苯环之间的二面角值71.21 (6)°()和54.73 (7)°()表明。最后,在外层羟基 - H原子的排布上存在差异,其相对取向相反。在计算得到的气相结构中,除了垂直的苯环外,整个分子是平面的。在分子堆积中, 和 分子通过N - H⋯S氢键和八元{⋯HNCS}合成子组装成一个双分子聚集体。二聚体组装体通过羟基 - O - H⋯O(羟基)氢键连接成超分子链,并且通过羟基 - O - H⋯π(苯基)相互作用连接成双链。双链通过苯基 - C - H⋯O(羟基)和苯基 - C - H⋯π(苯基)相互作用连接成三维结构。整体组装沿着 - 轴方向定义了柱体,氯仿分子位于其中,通过氯仿次甲基 - C - H⋯S(硫酮)和苯基 - C - H⋯Cl接触得以稳定。对计算得到的 Hirshfeld 表面、非共价相互作用图和相互作用能的分析证实了上述相互作用的重要性,同时也证实了协同的、非标准相互作用如π(苯)⋯π(氢键介导环)接触的重要性。

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