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DNA 模板点击连接链反应在非均相 CuO 作用下的酶免扩增和核酸超灵敏检测。

DNA-Templated Click Ligation Chain Reaction Catalyzed by Heterogeneous CuO for Enzyme-Free Amplification and Ultrasensitive Detection of Nucleic Acids.

机构信息

MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and Storage, School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, Heilongjiang 150001, P. R. China.

Department of Biochemistry and Biomedical Sciences, McMaster University, 1280 Main Street West, Hamilton, Ontario L8S 4K1, Canada.

出版信息

Anal Chem. 2024 Jun 18;96(24):10028-10037. doi: 10.1021/acs.analchem.4c01663. Epub 2024 Jun 10.

Abstract

Nucleic acids play a pivotal role in the diagnosis of diseases. However, rapid, cost-efficient, and ultrasensitive identification of nucleic acid targets still represents a significant challenge. Herein, we describe an enzyme-free DNA amplification method capable of achieving accurate and ultrasensitive nucleic acid detection via NA-emplated lick igation hain eaction (DT-CLCR) catalyzed by a eterogeneous anocatalyst made of CuO (hnCuO). This hnCuO-DT-CLCR method is built on two cross-amplifying hnCuO-catalyzed DNA-templated azide-alkyne cycloaddition-driven DNA ligation reactions that boast a fast reaction rate and a high DNA ligation yield in minutes, enabling rapid exponential amplification of specific DNA targets. This newly developed hnCuO-DT-CLCR-enabled DNA amplification strategy is further integrated with two signal reporting mechanisms to achieve low-cost and easy-to-use biosensors: an electrochemical sensor through the conjugation of a methylene blue redox reporter to a DNA probe used in hnCuO-DT-CLCR and a colorimetric sensor through the incorporation of the split-to-intact G-quadruplex DNAzyme encoded into hnCuO-DT-CLCR. Both sensors are able to achieve specific detection of the intended DNA target with a limit of detection at aM ranges, even when challenged in complex biological matrices. The combined hnCuO-DT-CLCR and sensing strategies offer attractive universal platforms for enzyme-free and yet efficient detection of specific nucleic acid targets.

摘要

核酸在疾病诊断中发挥着关键作用。然而,快速、经济高效、超灵敏地识别核酸靶标仍然是一个重大挑战。在此,我们描述了一种无酶 DNA 扩增方法,该方法能够通过由 CuO(hnCuO)制成的异相纳米催化剂催化的无酶核酸模板点击连接链反应(DT-CLCR)实现准确和超灵敏的核酸检测。这种 hnCuO-DT-CLCR 方法基于两种交叉扩增的 hnCuO 催化的 DNA 模板叠氮-炔环加成驱动的 DNA 连接反应,其在几分钟内具有快速的反应速率和高的 DNA 连接产率,能够快速指数扩增特定的 DNA 靶标。这种新开发的 hnCuO-DT-CLCR 启用的 DNA 扩增策略进一步与两种信号报告机制集成,以实现低成本和易于使用的生物传感器:通过将亚甲基蓝氧化还原报告分子与 hnCuO-DT-CLCR 中使用的 DNA 探针缀合的电化学传感器,以及通过将 hnCuO-DT-CLCR 中编码的分裂到完整的 G-四链体 DNA 酶掺入的比色传感器。这两种传感器都能够实现对预期 DNA 靶标的特异性检测,检测限可达 aM 范围,即使在复杂的生物基质中也具有挑战性。组合的 hnCuO-DT-CLCR 和传感策略为无酶但高效检测特定核酸靶标提供了有吸引力的通用平台。

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