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妊娠期体重增加的基因组学见解:揭示组织特异性机制和途径

Genomic Insights into Gestational Weight Gain: Uncovering Tissue-Specific Mechanisms and Pathways.

作者信息

Jasper Elizabeth, Hellwege Jacklyn, Greene Catherine, Edwards Todd L, Edwards Digna Velez

机构信息

Vanderbilt Unviersity Medical Center.

Vanderbilt University Medical Center.

出版信息

Res Sq. 2024 May 30:rs.3.rs-4427250. doi: 10.21203/rs.3.rs-4427250/v1.

Abstract

Increasing gestational weight gain (GWG) is linked to adverse outcomes in pregnant persons and their children. The Early Growth Genetics (EGG) Consortium identified previously genetic variants that could contribute to early, late, and total GWG from fetal and maternal genomes. However, the biologic mechanisms and tissue-Specificity of these variants in GWG is unknown. We evaluated the association between genetically predicted gene expression in five relevant maternal (subcutaneous and visceral adipose, breast, uterus, and whole blood) from GTEx (v7) and fetal (placenta) tissues and early, late, and total GWG using S-PrediXcan. We tested enrichment of pre-defined biological pathways for nominally ( < 0.05) significant associations using the GENE2FUNC module from Functional Mapping and Annotation of Genome-Wide Association Studies. After multiple testing correction, we did not find significant associations between maternal and fetal gene expression and early, late, or total GWG. There was significant enrichment of several biological pathways, including metabolic processes, secretion, and intracellular transport, among nominally significant genes from the maternal analyses (false discovery rate -values: 0.016 to 9.37×10). Enriched biological pathways varied across pregnancy. Though additional research is necessary, these results indicate that diverse biological pathways are likely to impact GWG, with their influence varying by tissue and weeks of gestation.

摘要

孕期体重增加(GWG)的增加与孕妇及其子女的不良结局有关。早期生长遗传学(EGG)联盟先前已鉴定出可能导致胎儿和母体基因组早期、晚期及总体GWG的基因变异。然而,这些变异在GWG中的生物学机制和组织特异性尚不清楚。我们使用S-PrediXcan评估了来自GTEx(v7)的五种相关母体组织(皮下和内脏脂肪、乳腺、子宫和全血)以及胎儿组织(胎盘)中基因预测的基因表达与早期、晚期及总体GWG之间的关联。我们使用全基因组关联研究功能映射和注释中的GENE2FUNC模块,对名义上(<0.05)显著关联的预定义生物学途径进行富集测试。经过多重检验校正后,我们未发现母体和胎儿基因表达与早期、晚期或总体GWG之间存在显著关联。在母体分析中名义上显著的基因中,有几个生物学途径显著富集,包括代谢过程、分泌和细胞内运输(错误发现率值:0.016至9.37×10)。富集的生物学途径在整个孕期有所不同。尽管还需要进一步研究,但这些结果表明,多种生物学途径可能会影响GWG,其影响因组织和孕周而异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a5a/11160900/b322752735ce/nihpp-rs4427250v1-f0001.jpg

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