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巴西陆地和海洋生物群中巨型病毒的长期勘探研究。

A long-term prospecting study on giant viruses in terrestrial and marine Brazilian biomes.

机构信息

Laboratório de vírus, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte city, Minas Gerais, Brazil.

Centre de Recherche du Centre Hospitalier Universitaire de Québec, Université Laval, Laval city, Québec, Canada.

出版信息

Virol J. 2024 Jun 10;21(1):135. doi: 10.1186/s12985-024-02404-z.

Abstract

The discovery of mimivirus in 2003 prompted the search for novel giant viruses worldwide. Despite increasing interest, the diversity and distribution of giant viruses is barely known. Here, we present data from a 2012-2022 study aimed at prospecting for amoebal viruses in water, soil, mud, and sewage samples across Brazilian biomes, using Acanthamoeba castellanii for isolation. A total of 881 aliquots from 187 samples covering terrestrial and marine Brazilian biomes were processed. Electron microscopy and PCR were used to identify the obtained isolates. Sixty-seven amoebal viruses were isolated, including mimiviruses, marseilleviruses, pandoraviruses, cedratviruses, and yaraviruses. Viruses were isolated from all tested sample types and almost all biomes. In comparison to other similar studies, our work isolated a substantial number of Marseillevirus and cedratvirus representatives. Taken together, our results used a combination of isolation techniques with microscopy, PCR, and sequencing and put highlight on richness of giant virus present in different terrestrial and marine Brazilian biomes.

摘要

2003 年,拟菌病毒的发现促使人们在全球范围内寻找新型巨型病毒。尽管人们越来越感兴趣,但巨型病毒的多样性和分布情况仍知之甚少。在这里,我们展示了 2012 年至 2022 年期间一项研究的数据,该研究旨在使用棘阿米巴原虫(Acanthamoeba castellanii)进行分离,从巴西各地的水、土壤、泥和污水样本中寻找阿米巴病毒。共处理了来自覆盖陆地和海洋巴西生物群系的 187 个样本的 881 个等分试样。电子显微镜和 PCR 用于鉴定获得的分离物。共分离出 67 种阿米巴病毒,包括 mimiviruses、marseilleviruses、pandoraviruses、cedratviruses 和 yaraviruses。病毒从所有测试的样本类型和几乎所有的生物群系中分离出来。与其他类似的研究相比,我们的工作分离出了大量的 Marseillevirus 和 cedratvirus 代表。总的来说,我们的研究结果结合了显微镜、PCR 和测序等分离技术,突出了不同陆地和海洋巴西生物群系中存在的巨型病毒的丰富度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a61/11165748/d152cc8ab139/12985_2024_2404_Fig1_HTML.jpg

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