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新型化合物作为 AChE 和 GSK-3β双重抑制剂治疗阿尔茨海默病的计算研究。

Computational Investigation of Novel Compounds as Dual Inhibitors of AChE and GSK-3β for the Treatment of Alzheimer's Disease.

机构信息

Department of Pharmaceutical Chemistry, BVDU's Poona College of Pharmacy, Pune, 411038, Maharashtra, India.

Department of Pharmaceutical Chemistry, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, 576104, India.

出版信息

Curr Top Med Chem. 2024;24(19):1738-1753. doi: 10.2174/0115680266295740240602122613.

Abstract

BACKGROUND

Alzheimer's disease (AD) stands out as one of the most devastating and prevalent neurodegenerative disorders known today. Researchers have identified several enzymatic targets associated with AD among which Glycogen synthase kinase-3β (GSK-3β) and Acetylcholinesterase (AChE) are prominent ones. Unfortunately, the market offers very few drugs for treating or managing AD, and none have shown significant efficacy against it.

OBJECTIVES

To address this critical issue, the design and discovery of dual inhibitors will represent a potential breakthrough in the fight against AD. In the pursuit of designing novel dual inhibitors, we explored molecular docking and dynamics analyses of tacrine and amantadine uredio-linked amide analogs such as GSK-3β and AChE dual inhibitors for curtailing AD. Tacrine and adamantine are the FDA-approved drugs that were structurally modified to design and develop novel drug candidates that may demonstrate concurrently dual selectivity towards GSK-3β and AChE.

METHODS

In the following study, molecular docking was executed by employing AutoDock Vina, and molecular dynamics and ADMET predictions were made using Desmond, Qikprop modules of Schrödinger.

RESULTS

Our findings revealed that compounds DST2 and DST11 exhibited remarkable molecular interactions with active sites of GSK-3β and AChE, respectively. These compounds effectively interacted with key amino acids, namely Lys85, Val135, Asp200, and Phe295, resulting in highly favourable docking energies of -9.7 and -12.7 kcal/mol. Furthermore, through molecular dynamics simulations spanning a trajectory of 100 ns, we confirmed the stability of ligands DST2 and DST11 within the active cavities of GSK-3β and AChE. The compounds exhibiting the most promising docking results also demonstrated excellent ADMET profiles. Notably, DST21 displayed an outstanding human oral absorption rate of 76.358%, surpassing the absorption rates of other molecules.

CONCLUSION

Overall, our in-silico studies revealed that the designed molecules showed potential as novel anti-Alzheimer agents capable of inhibiting both GSK-3β and AChE simultaneously. So, in the future, the designing and development of dual inhibitors will harbinger a new era of drug design in AD treatment.

摘要

背景

阿尔茨海默病(AD)是当今最具破坏性和最常见的神经退行性疾病之一。研究人员已经确定了几种与 AD 相关的酶靶标,其中糖原合酶激酶-3β(GSK-3β)和乙酰胆碱酯酶(AChE)是突出的靶标。不幸的是,市场上治疗或管理 AD 的药物非常少,而且没有一种药物对 AD 有显著疗效。

目的

为了解决这一关键问题,设计和发现双重抑制剂将成为对抗 AD 的潜在突破。在设计新型双重抑制剂的过程中,我们探索了 Tacrine 和金刚烷的分子对接和动力学分析,将它们作为 GSK-3β 和 AChE 双重抑制剂,用于抑制 AD。Tacrine 和金刚烷是 FDA 批准的药物,它们的结构经过修饰,用于设计和开发可能同时对 GSK-3β 和 AChE 具有双重选择性的新型候选药物。

方法

在本研究中,采用 AutoDock Vina 进行分子对接,采用 Desmond 和 Schrödinger 的 Qikprop 模块进行分子动力学和 ADMET 预测。

结果

我们的研究结果表明,化合物 DST2 和 DST11 分别与 GSK-3β 和 AChE 的活性位点表现出显著的分子相互作用。这些化合物与关键氨基酸(即 Lys85、Val135、Asp200 和 Phe295)有效相互作用,导致非常有利的 docking 能量分别为-9.7 和-12.7 kcal/mol。此外,通过 100 ns 轨迹的分子动力学模拟,我们确认了配体 DST2 和 DST11 在 GSK-3β 和 AChE 的活性腔中的稳定性。表现出最有希望的对接结果的化合物也表现出了出色的 ADMET 特征。值得注意的是,DST21 表现出卓越的人类口服吸收率 76.358%,超过了其他分子的吸收率。

结论

总之,我们的计算机研究表明,设计的分子具有作为新型抗 AD 药物的潜力,能够同时抑制 GSK-3β 和 AChE。因此,在未来,双重抑制剂的设计和开发将预示着 AD 治疗药物设计的新时代。

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