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K-规格与黄酮 P0 探针在 G-四链体 DNA 中。

K-Specification with Flavone P0 Probe in a G-Quadruplex DNA.

机构信息

State Key Laboratory of Catalysis, Chinese Academy of Sciences, Dalian Institute of Chemical Physics, Dalian 116023, China.

Key Laboratory of Separation Science for Analytical Chemistry, Chinese Academy of Sciences, Dalian Institute of Chemical Physics, Dalian 116023, China.

出版信息

Anal Chem. 2024 Jul 2;96(26):10835-10840. doi: 10.1021/acs.analchem.4c02368. Epub 2024 Jun 18.

Abstract

G-quadruplex (G4) DNA is considered as a prospective therapeutic target due to its potential biological significance. To understand G4 biological roles and function, a G4-specific fluorescent probe is necessary. However, it is difficult for versatile G4 to precisely recognize without perturbing their folding dynamics. Herein, we reported that flavone P0 can be a fluorescent probe for G4 DNA-specific recognition and have developed a highly selective detection of K ion by dimeric G4/P0 system. When comparing various nucleic acid structures, including G4, i-motif, ss/ds-DNA, and triplex, an apparent fluorescence enhancement is observed in the presence of G4 DNA for 85-fold, but only 8-fold for non-G4 DNA. Furthermore, based on fluorescent probe of flavone P0 for G4 DNA screening, the noncovalent dimeric G4/P0 system is exploited as a K sensor, that selectively responds to K with a 513-fold fluorescence enhancement and a detection range for K ion concentration from 0 to 500 mM. This K sensor also has a remarkably anti-interference ability for other metal cations, especially for a high concentration of Na. These results have demonstrated that flavone P0 is an efficient tool for monitoring G-quadruplex DNA and endows flavone P0 with bioanalytical and medicinal applications.

摘要

G-四链体 (G4) DNA 因其潜在的生物学意义而被认为是有前途的治疗靶点。为了了解 G4 的生物学作用和功能,需要使用 G4 特异性荧光探针。然而,由于 G4 的折叠动力学复杂,难以在不干扰其折叠动力学的情况下对其进行精确识别。在此,我们报道黄酮 P0 可以作为 G4 DNA 特异性识别的荧光探针,并开发了一种通过二聚体 G4/P0 系统对 K 离子进行高选择性检测的方法。在比较各种核酸结构,包括 G4、i- 发夹、ss/ds-DNA 和三螺旋时,在存在 G4 DNA 的情况下观察到明显的荧光增强,而对于非 G4 DNA 仅观察到 8 倍的增强。此外,基于黄酮 P0 对 G4 DNA 的筛选荧光探针,将非共价二聚体 G4/P0 系统用作 K 传感器,该传感器对 K 具有 513 倍的荧光增强响应,并具有 0 至 500 mM K 离子浓度的检测范围。该 K 传感器对其他金属阳离子,特别是高浓度的 Na,也具有出色的抗干扰能力。这些结果表明,黄酮 P0 是监测 G-四链体 DNA 的有效工具,并赋予黄酮 P0 生物分析和医学应用的潜力。

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