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通过蛋白质组学研究寻找大脑常染色体显性动脉病伴皮质下梗死和白质脑病的新生物学途径

A Search for New Biological Pathways in Cerebral Autosomal Dominant Arteriopathy with Subcortical Infarcts and Leukoencephalopathy by Proteomic Research.

作者信息

Menéndez-Valladares Paloma, Acevedo Aguilera Rosa, Núñez-Jurado David, López Azcárate Cristina, Domínguez Mayoral Ana María, Fernández-Vega Alejandro, Pérez-Sánchez Soledad, Lamana Vallverdú Marcel, García-Sánchez María Isabel, Morales Bravo María, Busquier Teresa, Montaner Joan

机构信息

Department of Neurology, Virgen Macarena University Hospital, 41009 Seville, Spain.

Department of Neurology, Institute of Biomedicine of Seville (IBIS), 41013 Seville, Spain.

出版信息

J Clin Med. 2024 May 27;13(11):3138. doi: 10.3390/jcm13113138.

Abstract

: Cerebral Autosomal Dominant Arteriopathy with Subcortical Infarcts and Leukoencephalopathy (CADASIL) is a hereditary small vessel disease leading to significant morbidity and mortality. Despite advances in genetic diagnosis, the underlying pathophysiology remains incompletely understood. Proteomic studies offer insights into disease mechanisms by identifying altered protein expression patterns. Here, we conducted a proteomic analysis to elucidate molecular pathways associated with CADASIL. : We enrolled genetically diagnosed CADASIL patients and healthy, genetically related controls. Plasma samples were subjected to proteomic analysis using the Olink platform, measuring 552 proteins across six panels. The data were analyzed from several approaches by using three different statistical methods: Exploratory Principal Component Analysis (PCA) and Partial Least Squares-Discriminant Analysis (PLS-DA), differential expression with moderated -test, and gene set enrichment analysis (GSEA). In addition, bioinformatics analysis, including volcano plot, heatmap, and Variable Importance on Projection (VIP) scores from the PLS-DA model were drawn. : Significant differences in protein expression were observed between CADASIL patients and controls. RSPO1 and FGF-19 exhibited elevated levels ( < 0.05), while PPY showed downregulation ( < 0.05) in CADASIL patients, suggesting their involvement in disease pathogenesis. Furthermore, MIC-A/B expression varied significantly between patients with mutations in exon 4 versus exon 11 of the gene ( < 0.05), highlighting potential immunological mechanisms underlying CADASIL. We identified altered pathways using GSEA, applied after ranking the study data. : Our study provides novel insights into the proteomic profile of CADASIL, identifying dysregulated proteins associated with vascular pathology, metabolic dysregulation, and immune activation. These findings contribute to a deeper understanding of CADASIL pathophysiology and may inform the development of targeted therapeutic strategies. Further research is warranted to validate these biomarkers and elucidate their functional roles in disease progression.

摘要

大脑常染色体显性动脉病伴皮质下梗死和白质脑病(CADASIL)是一种遗传性小血管疾病,可导致严重的发病率和死亡率。尽管基因诊断取得了进展,但其潜在的病理生理学仍未完全了解。蛋白质组学研究通过识别改变的蛋白质表达模式,为疾病机制提供了见解。在这里,我们进行了蛋白质组学分析,以阐明与CADASIL相关的分子途径。

我们招募了经基因诊断的CADASIL患者以及健康的、有基因关联的对照者。使用Olink平台对血浆样本进行蛋白质组学分析,在六个检测板中检测552种蛋白质。通过使用三种不同的统计方法,从多种途径对数据进行分析:探索性主成分分析(PCA)和偏最小二乘判别分析(PLS-DA)、使用适度t检验进行差异表达分析以及基因集富集分析(GSEA)。此外,还绘制了生物信息学分析图,包括火山图、热图以及PLS-DA模型的投影变量重要性(VIP)得分。

在CADASIL患者和对照者之间观察到蛋白质表达存在显著差异。在CADASIL患者中,RSPO1和FGF-19水平升高(P<0.05),而PPY表现出下调(P<0.05),表明它们参与了疾病的发病机制。此外,在NOTCH3基因第4外显子与第11外显子突变的患者之间,MIC-A/B表达存在显著差异(P<0.05),突出了CADASIL潜在的免疫机制。在对研究数据进行排序后,我们使用GSEA确定了改变的途径。

我们的研究为CADASIL的蛋白质组学特征提供了新的见解,确定了与血管病理、代谢失调和免疫激活相关的失调蛋白质。这些发现有助于更深入地了解CADASIL的病理生理学,并可能为靶向治疗策略的开发提供信息。有必要进行进一步的研究来验证这些生物标志物,并阐明它们在疾病进展中的功能作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2699/11172732/d9e858e6edd3/jcm-13-03138-g001.jpg

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