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RUVBL1/2 阻断剂靶向 YTHDF1 活性以抑制 m6A 依赖性致癌翻译和结直肠肿瘤发生。

RUVBL1/2 Blockade Targets YTHDF1 Activity to Suppress m6A-Dependent Oncogenic Translation and Colorectal Tumorigenesis.

机构信息

Institute of Digestive Disease and Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China.

Department of Anatomical and Cellular Pathology, The Chinese University of Hong Kong, Hong Kong SAR, China.

出版信息

Cancer Res. 2024 Sep 4;84(17):2856-2872. doi: 10.1158/0008-5472.CAN-23-2081.

Abstract

The N6-methyladenosine (m6A) RNA-binding protein YTHDF1 is frequently overexpressed in colorectal cancer and drives chemotherapeutic resistance. To systematically identify druggable targets in colorectal cancer with high expression of YTHDF1, this study used a CRISPR/Cas9 screening strategy that revealed RUVBL1 and RUVBL2 as putative targets. RUVBL1/2 were overexpressed in primary colorectal cancer samples and represented independent predictors of poor patient prognosis. Functionally, loss of RUVBL1/2 preferentially impaired the growth of YTHDF1-high colorectal cancer cells, patient-derived primary colorectal cancer organoids, and subcutaneous xenografts. Mechanistically, YTHFD1 and RUVBL1/2 formed a positive feedforward circuit to accelerate oncogenic translation. YTHDF1 bound to m6A-modified RUVBL1/2 mRNA to promote translation initiation and protein expression. Coimmunoprecipitation and mass spectrometry identified that RUVBL1/2 reciprocally interacted with YTHDF1 at 40S translation initiation complexes. Consequently, RUVBL1/2 depletion stalled YTHDF1-driven oncogenic translation and nascent protein biosynthesis, leading to proliferative arrest and apoptosis. Ribosome sequencing revealed that RUVBL1/2 loss impaired the activation of MAPK, RAS, and PI3K-AKT signaling induced by YTHDF1. Finally, the blockade of RUVBL1/2 by the pharmacological inhibitor CB6644 or vesicle-like nanoparticle-encapsulated siRNAs preferentially arrested the growth of YTHDF1-expressing colorectal cancer in vitro and in vivo. Our findings show that RUVBL1/2 are potential prognostic markers and druggable targets that regulate protein translation in YTHDF1-high colorectal cancer. Significance: RUVBL1/2 inhibition is a therapeutic strategy to abrogate YTHDF1-driven oncogenic translation and overcome m6A dysregulation in colorectal cancer.

摘要

N6-甲基腺苷(m6A)RNA 结合蛋白 YTHDF1 在结直肠癌中经常过表达,并驱动化疗耐药性。为了系统地鉴定 YTHDF1 高表达的结直肠癌中可用药的靶标,本研究使用了 CRISPR/Cas9 筛选策略,该策略揭示了 RUVBL1 和 RUVBL2 为潜在靶标。RUVBL1/2 在原发性结直肠癌样本中过表达,并且是患者预后不良的独立预测因子。功能上,RUVBL1/2 的缺失优先损害 YTHDF1 高表达的结直肠癌细胞、患者来源的原发性结直肠癌类器官和皮下异种移植物的生长。在机制上,YTHFD1 和 RUVBL1/2 形成正反馈回路以加速致癌翻译。YTHDF1 与 m6A 修饰的 RUVBL1/2 mRNA 结合以促进翻译起始和蛋白质表达。共免疫沉淀和质谱分析鉴定出 RUVBL1/2 在 40S 翻译起始复合物中与 YTHDF1 相互作用。因此,RUVBL1/2 的耗竭使 YTHDF1 驱动的致癌翻译和新生蛋白质生物合成停滞不前,导致增殖停滞和细胞凋亡。核糖体测序表明,RUVBL1/2 的缺失损害了 YTHDF1 诱导的 MAPK、RAS 和 PI3K-AKT 信号的激活。最后,通过药理学抑制剂 CB6644 或囊泡样纳米颗粒包封的 siRNAs 阻断 RUVBL1/2 ,优先阻止体外和体内 YTHDF1 表达的结直肠癌的生长。我们的研究结果表明,RUVBL1/2 是潜在的预后标志物和可药用靶标,可调节 YTHDF1 高表达结直肠癌中的蛋白质翻译。意义:RUVBL1/2 抑制是一种治疗策略,可消除 YTHDF1 驱动的致癌翻译并克服结直肠癌中的 m6A 失调。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/422e/11372367/45421f57d359/can-23-2081_f1.jpg

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